Sopen02g020360

Description : PPR repeat

Gene families : OG_42_0009200 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009200_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen02g020360
Cluster	HCCA clusters: Cluster_225

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	InterProScan predictions
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR032867	DYW_dom	555	678
IPR002885	Pentatricopeptide_repeat	61	84
IPR002885	Pentatricopeptide_repeat	456	481
IPR002885	Pentatricopeptide_repeat	89	119
IPR002885	Pentatricopeptide_repeat	120	149
IPR002885	Pentatricopeptide_repeat	180	228
IPR002885	Pentatricopeptide_repeat	381	429
IPR002885	Pentatricopeptide_repeat	281	328

External Links

No external refs found!