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  5. Sopen02g020540

Sopen02g020540


Description : Bromodomain


Gene families : OG_42_0000275 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000275_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen02g020540
Cluster HCCA clusters: Cluster_113

Target Alias Description ECC score Gene Family Method Actions
At3g01770 No alias Transcription factor GTE11... 0.04 Orthogroups_2024-Update
At3g27260 No alias Global transcription factor group E8... 0.02 Orthogroups_2024-Update
Bradi3g09460 No alias global transcription factor group E4 0.03 Orthogroups_2024-Update
Brara.H02969.1 No alias transcriptional co-activator *(BET/GTE) 0.05 Orthogroups_2024-Update
Cre10.g455500 No alias global transcription factor group E3 0.02 Orthogroups_2024-Update
MA_87057g0010 No alias (at1g06230 : 305.0) This gene is predicted to encode a... 0.03 Orthogroups_2024-Update
Mp1g20280.1 No alias transcriptional co-activator (BET/GTE) 0.02 Orthogroups_2024-Update
Mp2g14370.1 No alias transcriptional co-activator (BET/GTE) 0.02 Orthogroups_2024-Update
Potri.009G080000 No alias global transcription factor group E7 0.03 Orthogroups_2024-Update
Seita.1G016100.1 No alias transcriptional co-activator *(BET/GTE) 0.03 Orthogroups_2024-Update
Solyc02g071510 No alias Transcription factor GTE12-like protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc02g091660 No alias Transcription factor GTE4 (AHRD V3.3 *** A0A0B2QCM2_GLYSO) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001487 Bromodomain 90 173
IPR027353 NET_dom 233 295
No external refs found!