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  5. Sopen02g020960

Sopen02g020960


Description : Family of unknown function (DUF500)


Gene families : OG_42_0001621 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001621_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen02g020960
Cluster HCCA clusters: Cluster_189

Target Alias Description ECC score Gene Family Method Actions
Bradi1g20900 No alias RING/FYVE/PHD-type zinc finger family protein 0.04 Orthogroups_2024-Update
Bradi1g38170 No alias RING/FYVE/PHD-type zinc finger family protein 0.02 Orthogroups_2024-Update
Glyma.17G045300 No alias RING/FYVE/PHD-type zinc finger family protein 0.05 Orthogroups_2024-Update
Potri.004G062500 No alias RING/FYVE/PHD-type zinc finger family protein 0.03 Orthogroups_2024-Update
Potri.011G071900 No alias RING/FYVE/PHD-type zinc finger family protein 0.02 Orthogroups_2024-Update
Seita.2G389900.1 No alias auxiliary VPS23-interacting component *(CFS1) of ESCRT-I complex 0.04 Orthogroups_2024-Update
evm.model.contig_3441.16 No alias (at3g43230 : 118.0) RING/FYVE/PHD-type zinc finger... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000306 Znf_FYVE 378 443
IPR007461 Ysc84_actin-binding 560 684
No external refs found!