Sopen02g021240

Description : Rho termination factor, N-terminal domain

Gene families : OG_42_0009869 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009869_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen02g021240
Cluster	HCCA clusters: Cluster_15

Target	Alias	Description	ECC score	Gene Family Method
A4A49_36279	No alias	hypothetical protein	0.04	Orthogroups_2024-Update
At4g18740	No alias	Rho termination factor [Source:UniProtKB/TrEMBL;Acc:F4JRN0]	0.03	Orthogroups_2024-Update
Mp3g15510.1	No alias	no hits & (original description: none)	0.02	Orthogroups_2024-Update
Solyc02g072260	No alias	SAP-like protein BP-73 (AHRD V3.3 - M8BMZ0_AEGTA)	0.13	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006353	DNA-templated transcription, termination	IEA	InterProScan predictions
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0016070	RNA metabolic process	None	Extended
BP	GO:0018130	heterocycle biosynthetic process	None	Extended
BP	GO:0019438	aromatic compound biosynthetic process	None	Extended
BP	GO:0032774	RNA biosynthetic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034654	nucleobase-containing compound biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901362	organic cyclic compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR011112	Rho_N	216	245

External Links

No external refs found!

Sopen02g021240

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation