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  5. Sopen02g021520

Sopen02g021520


Description : Seed dormancy control


Gene families : OG_42_0001202 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001202_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen02g021520
Cluster HCCA clusters: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
173073 No alias Function unknown 0.02 Orthogroups_2024-Update
At5g45830 No alias delay of germination 1 [Source:TAIR;Acc:AT5G45830] 0.03 Orthogroups_2024-Update
Mp1g28510.1 No alias transcription factor (DOG) 0.04 Orthogroups_2024-Update
Pp1s357_24V6 No alias F28A21.100; hypothetical protein [Arabidopsis thaliana] 0.03 Orthogroups_2024-Update
Pp1s39_376V6 No alias K15M2.2; DNA-binding protein-related [Arabidopsis thaliana] 0.04 Orthogroups_2024-Update
Sobic.003G062200.2 No alias DOG-type transcription factor 0.02 Orthogroups_2024-Update
Solyc02g072560 No alias LOW QUALITY:transcription factor-like protein (AHRD V3.3... 0.07 Orthogroups_2024-Update
Solyc02g073580 No alias No description available 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0006351 transcription, DNA-templated IEA InterProScan predictions
MF GO:0043565 sequence-specific DNA binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR025422 TGA_domain 28 106
No external refs found!