Sopen02g022210

Description : Receptor family ligand binding region

Gene families : OG_42_0000065 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000065_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen02g022210
Cluster	HCCA clusters: Cluster_105

Target	Alias	Description	ECC score	Gene Family Method
A4A49_28967	No alias	glutamate receptor 2.8	0.02	Orthogroups_2024-Update
At2g29100	No alias	Glutamate receptor [Source:UniProtKB/TrEMBL;Acc:A0A178VR79]	0.03	Orthogroups_2024-Update
Brara.D01493.1	No alias	ligand-gated cation channel *(GLR)	0.03	Orthogroups_2024-Update
Brara.D01500.1	No alias	ligand-gated cation channel *(GLR)	0.02	Orthogroups_2024-Update
Glyma.13G233300	No alias	glutamate receptor 2.7	0.03	Orthogroups_2024-Update
Glyma.16G061701	No alias	glutamate receptor 2	0.04	Orthogroups_2024-Update
PSME_00009648-RA	No alias	(at4g35290 : 566.0) Encodes a putative glutamate...	0.03	Orthogroups_2024-Update
Potri.001G375200	No alias	glutamate receptor 2.7	0.03	Orthogroups_2024-Update
Potri.018G096300	No alias	glutamate receptor 2.7	0.02	Orthogroups_2024-Update
Seita.2G212500.1	No alias	ligand-gated cation channel *(GLR)	0.03	Orthogroups_2024-Update
Seita.2G212600.1	No alias	ligand-gated cation channel *(GLR)	0.03	Orthogroups_2024-Update
Sopen06g022640	No alias	Receptor family ligand binding region	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0004888	transmembrane signaling receptor activity	None	Extended
MF	GO:0004970	ionotropic glutamate receptor activity	IEA	InterProScan predictions
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005216	ion channel activity	None	Extended
MF	GO:0005230	extracellular ligand-gated ion channel activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0008066	glutamate receptor activity	None	Extended
MF	GO:0015075	ion transmembrane transporter activity	None	Extended
MF	GO:0015267	channel activity	None	Extended
MF	GO:0015276	ligand-gated ion channel activity	None	Extended
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
CC	GO:0016020	membrane	IEA	InterProScan predictions
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022824	transmitter-gated ion channel activity	None	Extended
MF	GO:0022834	ligand-gated channel activity	None	Extended
MF	GO:0022835	transmitter-gated channel activity	None	Extended
MF	GO:0022836	gated channel activity	None	Extended
MF	GO:0022838	substrate-specific channel activity	None	Extended
MF	GO:0022839	ion gated channel activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030594	neurotransmitter receptor activity	None	Extended
MF	GO:0038023	signaling receptor activity	None	Extended
MF	GO:0060089	molecular transducer activity	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001638	Solute-binding_3/MltF_N	470	784
IPR001320	Iontro_rcpt	785	815
IPR001828	ANF_lig-bd_rcpt	43	386

External Links

No external refs found!