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  5. Sopen02g022800

Sopen02g022800


Description : Dof domain, zinc finger


Gene families : OG_42_0000027 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen02g022800
Cluster HCCA clusters: Cluster_389

Target Alias Description ECC score Gene Family Method Actions
At1g26790 No alias Dof-type zinc finger DNA-binding family protein... 0.03 Orthogroups_2024-Update
At1g69570 No alias Cyclic dof factor 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SEZ3] 0.02 Orthogroups_2024-Update
At2g34140 No alias Cyclic dof factor 4 [Source:UniProtKB/Swiss-Prot;Acc:O22967] 0.04 Orthogroups_2024-Update
At5g39660 No alias Cyclic dof factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q93ZL5] 0.03 Orthogroups_2024-Update
Bradi3g25670 No alias cycling DOF factor 1 0.02 Orthogroups_2024-Update
Bradi3g51510 No alias Dof-type zinc finger DNA-binding family protein 0.03 Orthogroups_2024-Update
Bradi4g04260 No alias OBF-binding protein 3 0.02 Orthogroups_2024-Update
Brara.I00633.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
GRMZM2G142718 No alias Dof-type zinc finger DNA-binding family protein 0.02 Orthogroups_2024-Update
Glyma.05G025900 No alias cycling DOF factor 3 0.02 Orthogroups_2024-Update
Glyma.07G193900 No alias Dof-type zinc finger DNA-binding family protein 0.03 Orthogroups_2024-Update
Glyma.09G237000 No alias cycling DOF factor 2 0.04 Orthogroups_2024-Update
Glyma.10G173700 No alias Dof-type zinc finger DNA-binding family protein 0.04 Orthogroups_2024-Update
Glyma.11G140200 No alias OBF-binding protein 3 0.03 Orthogroups_2024-Update
Glyma.13G230200 No alias Dof-type zinc finger DNA-binding family protein 0.04 Orthogroups_2024-Update
Glyma.15G071400 No alias Dof-type zinc finger DNA-binding family protein 0.03 Orthogroups_2024-Update
Glyma.17G101000 No alias cycling DOF factor 3 0.02 Orthogroups_2024-Update
HORVU1Hr1G044560.1 No alias transcription factor *(DOF) 0.04 Orthogroups_2024-Update
HORVU1Hr1G074140.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
HORVU5Hr1G113220.6 No alias transcription factor *(DOF) 0.05 Orthogroups_2024-Update
LOC_Os01g15900 No alias expressed protein 0.02 Orthogroups_2024-Update
LOC_Os02g45200 No alias dof zinc finger domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os05g36900 No alias dof zinc finger domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os08g38220 No alias dof zinc finger domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_16692g0010 No alias (at5g60200 : 130.0) Encodes a Dof-type transcription... 0.03 Orthogroups_2024-Update
MA_18267g0010 No alias (at5g62940 : 141.0) HCA2 induces the formation of... 0.03 Orthogroups_2024-Update
Potri.004G046100 No alias OBF binding protein 4 0.02 Orthogroups_2024-Update
Potri.006G084200 No alias Dof-type zinc finger DNA-binding family protein 0.02 Orthogroups_2024-Update
Potri.006G202500 No alias Dof-type zinc finger DNA-binding family protein 0.04 Orthogroups_2024-Update
Sobic.008G136100.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Sobic.009G014400.1 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
Sopen02g022790 No alias Dof domain, zinc finger 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003851 Znf_Dof 38 92
No external refs found!