1. Home
  2. Species
  3. Solanum pennellii
  4. Sequence
  5. Sopen02g022830

Sopen02g022830


Description : Ribosomal protein S5, C-terminal domain


Gene families : OG_42_0006823 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006823_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen02g022830
Cluster HCCA clusters: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
A4A49_19809 No alias 30s ribosomal protein s5, chloroplastic 0.03 Orthogroups_2024-Update
Bradi2g06080 No alias Ribosomal protein S5 family protein 0.03 Orthogroups_2024-Update
Brara.D02059.1 No alias component *(uS5c) of small plastid ribosomal-subunit proteome 0.05 Orthogroups_2024-Update
Cre16.g659950 No alias Ribosomal protein S5 family protein 0.06 Orthogroups_2024-Update
GRMZM2G025855 No alias Ribosomal protein S5 family protein 0.06 Orthogroups_2024-Update
Glyma.07G198500 No alias Ribosomal protein S5 family protein 0.09 Orthogroups_2024-Update
Glyma.13G177900 No alias Ribosomal protein S5 family protein 0.07 Orthogroups_2024-Update
HORVU4Hr1G038570.1 No alias component *(uS5c) of small plastid ribosomal-subunit proteome 0.17 Orthogroups_2024-Update
Kfl00419_0080 kfl00419_0080_v1.1 (at2g33800 : 169.0) Ribosomal protein S5 family protein;... 0.04 Orthogroups_2024-Update
Potri.004G045700 No alias Ribosomal protein S5 family protein 0.03 Orthogroups_2024-Update
Pp1s2_598V6 No alias ribosomal protein s5 0.03 Orthogroups_2024-Update
Pp1s45_164V6 No alias 30s ribosomal protein s5 0.08 Orthogroups_2024-Update
Pp1s61_236V6 No alias 30s ribosomal protein s5 0.07 Orthogroups_2024-Update
Seita.9G187900.1 No alias component *(uS5c) of small plastid ribosomal-subunit proteome 0.1 Orthogroups_2024-Update
Sobic.001G191000.1 No alias component *(uS5c) of small plastid ribosomal-subunit proteome 0.08 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA InterProScan predictions
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013810 Ribosomal_S5_N 149 213
IPR005324 Ribosomal_S5_C 226 296
No external refs found!