Sopen02g023160

Description : Zinc finger, C3HC4 type (RING finger)

Gene families : OG_42_0000548 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000548_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen02g023160
Cluster	HCCA clusters: Cluster_18

Target	Alias	Description	ECC score	Gene Family Method
Bradi2g50940	No alias	RING/U-box superfamily protein	0.01	Orthogroups_2024-Update
Bradi4g00760	No alias	RING/U-box superfamily protein	0.02	Orthogroups_2024-Update
Glyma.06G293400	No alias	RING membrane-anchor 1	0.04	Orthogroups_2024-Update
Glyma.07G196000	No alias	RING membrane-anchor 1	0.02	Orthogroups_2024-Update
HORVU2Hr1G091220.1	No alias	E3 ubiquitin ligase *(RMA/MUSE)	0.03	Orthogroups_2024-Update
Potri.002G133000	No alias	RING/U-box superfamily protein	0.04	Orthogroups_2024-Update
Sobic.004G228100.2	No alias	E3 ubiquitin ligase *(RMA/MUSE)	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	IEA	InterProScan predictions

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR018957	Znf_C3HC4_RING-type	31	77

External Links

No external refs found!