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  5. Sopen02g023480

Sopen02g023480


Description : Dof domain, zinc finger


Gene families : OG_42_0000027 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen02g023480
Cluster HCCA clusters: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
29563 No alias OBF binding protein 4 0.02 Orthogroups_2024-Update
A4A49_10722 No alias dof zinc finger protein dof2.4 0.03 Orthogroups_2024-Update
A4A49_24184 No alias dof zinc finger protein dof3.1 0.04 Orthogroups_2024-Update
At1g64620 No alias Dof zinc finger protein DOF1.8... 0.02 Orthogroups_2024-Update
At3g47500 No alias Cyclic dof factor 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8LFV3] 0.03 Orthogroups_2024-Update
At4g21080 No alias Dof zinc finger protein DOF4.5... 0.03 Orthogroups_2024-Update
At5g62430 No alias Cyclic dof factor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8W1E3] 0.02 Orthogroups_2024-Update
At5g65590 No alias SCAP1 [Source:UniProtKB/TrEMBL;Acc:A0A178UIB2] 0.04 Orthogroups_2024-Update
Brara.A01411.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Brara.B03961.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Brara.D01727.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Brara.D02286.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Brara.F01530.1 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
Brara.F01753.1 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
Brara.G02475.1 No alias transcription factor *(DOF) 0.05 Orthogroups_2024-Update
Brara.H01965.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Brara.I03146.1 No alias transcription factor *(DOF) 0.04 Orthogroups_2024-Update
Brara.K00739.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
GRMZM2G064655 No alias TARGET OF MONOPTEROS 6 0.03 Orthogroups_2024-Update
Glyma.01G049400 No alias cycling DOF factor 3 0.02 Orthogroups_2024-Update
Glyma.02G062700 No alias OBF binding protein 1 0.02 Orthogroups_2024-Update
Glyma.05G018100 No alias OBF binding protein 4 0.02 Orthogroups_2024-Update
Glyma.05G037800 No alias Dof-type zinc finger DNA-binding family protein 0.03 Orthogroups_2024-Update
Glyma.06G194800 No alias cycling DOF factor 3 0.03 Orthogroups_2024-Update
Glyma.08G195300 No alias DOF zinc finger protein 1 0.02 Orthogroups_2024-Update
Glyma.13G230200 No alias Dof-type zinc finger DNA-binding family protein 0.02 Orthogroups_2024-Update
Glyma.13G237600 No alias TARGET OF MONOPTEROS 6 0.03 Orthogroups_2024-Update
Glyma.19G118000 No alias cycling DOF factor 3 0.05 Orthogroups_2024-Update
HORVU4Hr1G074990.1 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
HORVU5Hr1G113220.6 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
LOC_Os02g47810 No alias dof zinc finger domain containing protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os02g49440 No alias dof zinc finger domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_123810g0010 No alias (at5g60850 : 129.0) Encodes a zinc finger protein.; OBF... 0.03 Orthogroups_2024-Update
MA_74014g0010 No alias (at5g65590 : 133.0) Dof-type zinc finger DNA-binding... 0.03 Orthogroups_2024-Update
PSME_00052342-RA No alias (at5g62940 : 135.0) HCA2 induces the formation of... 0.03 Orthogroups_2024-Update
PSME_00056872-RA No alias (at5g60200 : 116.0) Encodes a Dof-type transcription... 0.03 Orthogroups_2024-Update
Potri.005G188900 No alias Dof-type zinc finger DNA-binding family protein 0.03 Orthogroups_2024-Update
Potri.007G036400 No alias OBF binding protein 1 0.02 Orthogroups_2024-Update
Potri.011G054300 No alias OBF binding protein 4 0.04 Orthogroups_2024-Update
Potri.015G048300 No alias OBF binding protein 4 0.03 Orthogroups_2024-Update
Sobic.002G236600.2 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
Solyc04g070960 No alias Dof zinc finger protein (AHRD V3.3 *-* W9S6D3_9ROSA) 0.05 Orthogroups_2024-Update
Solyc06g062520 No alias Dof zinc finger protein (AHRD V3.3 *** W9QMS6_9ROSA) 0.03 Orthogroups_2024-Update
Solyc08g082910 No alias Dof zinc finger protein (AHRD V3.3 *** W9RTF5_9ROSA) 0.02 Orthogroups_2024-Update
Sopen02g022790 No alias Dof domain, zinc finger 0.03 Orthogroups_2024-Update
Sopen03g022580 No alias Dof domain, zinc finger 0.04 Orthogroups_2024-Update
Sopen05g003730 No alias Dof domain, zinc finger 0.03 Orthogroups_2024-Update
Sopen06g026650 No alias Dof domain, zinc finger 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003851 Znf_Dof 42 95
No external refs found!