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  5. Sopen02g023650

Sopen02g023650


Description : WD domain, G-beta repeat


Gene families : OG_42_0006327 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006327_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen02g023650
Cluster HCCA clusters: Cluster_164

Target Alias Description ECC score Gene Family Method Actions
Cre03.g205800 No alias Transducin/WD40 repeat-like superfamily protein 0.02 Orthogroups_2024-Update
GRMZM2G327655 No alias Transducin/WD40 repeat-like superfamily protein 0.04 Orthogroups_2024-Update
Glyma.09G086200 No alias Transducin/WD40 repeat-like superfamily protein 0.06 Orthogroups_2024-Update
HORVU5Hr1G008820.2 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase complex 0.03 Orthogroups_2024-Update
Kfl00268_0060 kfl00268_0060_v1.1 (at1g65030 : 223.0) This gene is predicted to encode a... 0.05 Orthogroups_2024-Update
Pp1s131_75V6 No alias pak inhibitor 0.03 Orthogroups_2024-Update
Seita.3G392200.1 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase complex 0.06 Orthogroups_2024-Update
Sobic.008G171800.1 No alias substrate adaptor of CUL4-based E3 ubiquitin ligase complex 0.08 Orthogroups_2024-Update
Solyc02g078830 No alias Transducin/WD40 repeat-like superfamily protein (AHRD... 0.06 Orthogroups_2024-Update
evm.model.contig_2112.4 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001680 WD40_repeat 75 110
IPR001680 WD40_repeat 30 64
IPR001680 WD40_repeat 269 284
No external refs found!