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  5. Sopen02g023990

Sopen02g023990


Description : Leucine Rich repeat


Gene families : OG_42_0000339 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000339_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen02g023990
Cluster HCCA clusters: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
At3g26810 No alias AFB2 [Source:UniProtKB/TrEMBL;Acc:A0A178VGF7] 0.05 Orthogroups_2024-Update
At3g62980 No alias TIR1 [Source:UniProtKB/TrEMBL;Acc:A0A178VA54] 0.03 Orthogroups_2024-Update
Brara.B03253.1 No alias substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB) 0.02 Orthogroups_2024-Update
Brara.I04357.1 No alias substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB) 0.03 Orthogroups_2024-Update
Brara.I05093.1 No alias substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB) 0.03 Orthogroups_2024-Update
GRMZM5G848945 No alias auxin signaling F-box 3 0.02 Orthogroups_2024-Update
Glyma.03G209400 No alias F-box/RNI-like superfamily protein 0.02 Orthogroups_2024-Update
Glyma.14G062100 No alias RNI-like superfamily protein 0.06 Orthogroups_2024-Update
HORVU1Hr1G073230.1 No alias component *(COI) of jasmonic acid receptor complex 0.04 Orthogroups_2024-Update
MA_14836g0010 No alias (at3g62980 : 733.0) Encodes an auxin receptor that... 0.02 Orthogroups_2024-Update
MA_47869g0020 No alias (at4g24390 : 219.0) RNI-like superfamily protein; BEST... 0.03 Orthogroups_2024-Update
PSME_00005246-RA No alias (at3g62980 : 633.0) Encodes an auxin receptor that... 0.04 Orthogroups_2024-Update
PSME_00010803-RA No alias (at2g39940 : 593.0) Encodes a protein containing... 0.02 Orthogroups_2024-Update
PSME_00024314-RA No alias (at5g49980 : 743.0) auxin F-box protein 5 (AFB5);... 0.02 Orthogroups_2024-Update
Potri.004G033900 No alias F-box/RNI-like superfamily protein 0.03 Orthogroups_2024-Update
Pp1s277_20V6 No alias TLP2A TIR1-like auxin receptor protein 0.02 Orthogroups_2024-Update
Pp1s49_196V6 No alias TLP3A TIR1-like auxin receptor protein 0.03 Orthogroups_2024-Update
Sobic.006G056000.1 No alias substrate adaptor of SCF E3 ubiquitin ligase *(TIR1/AFB) 0.05 Orthogroups_2024-Update
Solyc02g079190 No alias TRANSPORT INHIBITOR RESPONSE 1 protein, putative (AHRD... 0.06 Orthogroups_2024-Update
Solyc05g052620 No alias Coronatine-insensitive 1 0.03 Orthogroups_2024-Update
Solyc06g084490 No alias No description available 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!