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  5. Sopen02g024920

Sopen02g024920


Description : Pectinesterase


Gene families : OG_42_0000066 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000066_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen02g024920
Cluster HCCA clusters: Cluster_260

Target Alias Description ECC score Gene Family Method Actions
At3g06830 No alias Probable pectinesterase/pectinesterase inhibitor 23... 0.03 Orthogroups_2024-Update
At3g27980 No alias Probable pectinesterase 30... 0.04 Orthogroups_2024-Update
At4g33220 No alias Probable pectinesterase/pectinesterase inhibitor 44... 0.02 Orthogroups_2024-Update
Bradi1g16780 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Orthogroups_2024-Update
Brara.I03256.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.03 Orthogroups_2024-Update
Glyma.03G234100 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Orthogroups_2024-Update
Glyma.09G076100 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.02 Orthogroups_2024-Update
HORVU5Hr1G010860.1 No alias EC_3.1 hydrolase acting on ester bond & pectin methylesterase 0.03 Orthogroups_2024-Update
LOC_Os01g13320 No alias pectinesterase, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os01g21034 No alias pectinesterase, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os08g34900 No alias pectinesterase, putative, expressed 0.02 Orthogroups_2024-Update
MA_10433178g0010 No alias (at3g49220 : 403.0) Plant invertase/pectin... 0.03 Orthogroups_2024-Update
MA_10434624g0020 No alias (at1g53830 : 387.0) encodes a pectin methylesterase;... 0.03 Orthogroups_2024-Update
MA_133919g0010 No alias (at4g02330 : 487.0) ATPMEPCRB; FUNCTIONS IN:... 0.03 Orthogroups_2024-Update
MA_436039g0010 No alias (p83948|pme3_citsi : 486.0) Pectinesterase-3 precursor... 0.03 Orthogroups_2024-Update
PSME_00003000-RA No alias (at1g53830 : 495.0) encodes a pectin methylesterase;... 0.03 Orthogroups_2024-Update
PSME_00026861-RA No alias (at1g53830 : 537.0) encodes a pectin methylesterase;... 0.03 Orthogroups_2024-Update
PSME_00029098-RA No alias (o04886|pme1_citsi : 512.0) Pectinesterase-1 precursor... 0.04 Orthogroups_2024-Update
Potri.001G162400 No alias pectin methylesterase 3 0.03 Orthogroups_2024-Update
Potri.001G209200 No alias Plant invertase/pectin methylesterase inhibitor superfamily 0.03 Orthogroups_2024-Update
Pp1s378_15V6 No alias Pectinesterase-2 precursor (Pectin methylesterase) (PE)... 0.03 Orthogroups_2024-Update
Solyc02g080220 No alias Pectinesterase (AHRD V3.3 *** K4B9P3_SOLLC) 0.03 Orthogroups_2024-Update
Solyc03g083840 No alias Pectinesterase (AHRD V3.3 *** K4BIF9_SOLLC) 0.03 Orthogroups_2024-Update
Solyc06g051960 No alias Pectinesterase (AHRD V3.3 *** K4C5Y2_SOLLC) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004857 enzyme inhibitor activity IEA InterProScan predictions
MF GO:0030599 pectinesterase activity IEA InterProScan predictions
BP GO:0042545 cell wall modification IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR006501 Pectinesterase_inhib_dom 53 195
IPR000070 Pectinesterase_cat 235 531
No external refs found!