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  5. Sopen02g025090

Sopen02g025090


Description : IQ calmodulin-binding motif


Gene families : OG_42_0005597 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005597_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen02g025090
Cluster HCCA clusters: Cluster_191

Target Alias Description ECC score Gene Family Method Actions
419634 No alias binding;calmodulin binding 0.09 Orthogroups_2024-Update
At4g21820 No alias binding;calmodulin binding [Source:TAIR;Acc:AT4G21820] 0.05 Orthogroups_2024-Update
Brara.A01208.1 No alias regulatory protein *(ASPM) of microtubule minus-end stability 0.11 Orthogroups_2024-Update
Glyma.07G259400 No alias binding;calmodulin binding 0.07 Orthogroups_2024-Update
Glyma.17G014900 No alias binding;calmodulin binding 0.1 Orthogroups_2024-Update
Kfl00016_0180 kfl00016_0180_v1.1 (at4g21820 : 156.0) binding;calmodulin binding;... 0.06 Orthogroups_2024-Update
Mp1g06540.1 No alias no hits & (original description: none) 0.04 Orthogroups_2024-Update
Solyc02g080390 No alias No description available 0.18 Orthogroups_2024-Update
Solyc02g080400 No alias Abnormal spindle-like microcephaly-associated-like... 0.17 Orthogroups_2024-Update
evm.model.tig00001335.3 No alias (at4g21820 : 95.1) binding;calmodulin binding; FUNCTIONS... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000048 IQ_motif_EF-hand-BS 1273 1290
IPR000048 IQ_motif_EF-hand-BS 1299 1316
IPR000048 IQ_motif_EF-hand-BS 1132 1150
IPR000048 IQ_motif_EF-hand-BS 1027 1043
IPR000048 IQ_motif_EF-hand-BS 1003 1019
IPR000048 IQ_motif_EF-hand-BS 1226 1243
IPR000048 IQ_motif_EF-hand-BS 1255 1271
IPR000048 IQ_motif_EF-hand-BS 890 907
IPR000048 IQ_motif_EF-hand-BS 1179 1196
IPR000048 IQ_motif_EF-hand-BS 954 971
IPR001715 CH-domain 434 523
No external refs found!