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  5. Sopen02g026930

Sopen02g026930


Description : RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)


Gene families : OG_42_0000483 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000483_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Solanum release: Sopen02g026930
Cluster HCCA clusters: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
A4A49_14499 No alias putative rna-binding protein arp1 0.03 Orthogroups_2024-Update
At1g76460 No alias RNA-binding (RRM/RBD/RNP motifs) family protein... 0.03 Orthogroups_2024-Update
At3g54770 No alias Probable RNA-binding protein ARP1... 0.03 Orthogroups_2024-Update
Bradi1g35760 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.02 Orthogroups_2024-Update
Bradi2g61350 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.02 Orthogroups_2024-Update
Bradi3g58710 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.03 Orthogroups_2024-Update
Brara.D00442.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.D02818.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Brara.E00103.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.G02114.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.G03572.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.I03278.1 No alias Unknown function 0.02 Orthogroups_2024-Update
LOC_Os03g17760 No alias RNA recognition motif containing protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_102223g0010 No alias (at1g76460 : 199.0) RNA-binding (RRM/RBD/RNP motifs)... 0.02 Orthogroups_2024-Update
PSME_00018643-RA No alias (at1g20880 : 184.0) RNA-binding (RRM/RBD/RNP motifs)... 0.03 Orthogroups_2024-Update
Potri.005G256700 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.02 Orthogroups_2024-Update
Pp1s126_15V6 No alias F9H16.14; RNA recognition motif (RRM)-containing protein... 0.02 Orthogroups_2024-Update
Solyc02g082270 No alias RNA binding protein, putative (AHRD V3.3 *** B9R8T5_RICCO) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000504 RRM_dom 36 93
No external refs found!