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  5. Sopen02g027750

Sopen02g027750


Description : Chitinase class I


Gene families : OG_42_0000472 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000472_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen02g027750
Cluster HCCA clusters: Cluster_340

Target Alias Description ECC score Gene Family Method Actions
443112 No alias basic chitinase 0.03 Orthogroups_2024-Update
A4A49_31315 No alias endochitinase b 0.04 Orthogroups_2024-Update
At3g12500 No alias Basic endochitinase B [Source:UniProtKB/Swiss-Prot;Acc:P19171] 0.05 Orthogroups_2024-Update
Bradi2g11140 No alias Chitinase family protein 0.03 Orthogroups_2024-Update
Bradi2g47210 No alias basic chitinase 0.04 Orthogroups_2024-Update
Bradi3g32340 No alias basic chitinase 0.02 Orthogroups_2024-Update
Brara.I00101.1 No alias Unknown function 0.03 Orthogroups_2024-Update
GRMZM2G064360 No alias Chitinase family protein 0.03 Orthogroups_2024-Update
GRMZM2G103668 No alias basic chitinase 0.02 Orthogroups_2024-Update
Glyma.16G119200 No alias basic chitinase 0.05 Orthogroups_2024-Update
HORVU1Hr1G017670.1 No alias Unknown function 0.03 Orthogroups_2024-Update
MA_10313114g0010 No alias (p24626|chi1_orysa : 327.0) Basic endochitinase 1... 0.02 Orthogroups_2024-Update
MA_8921185g0010 No alias (q9frv0|chic_secce : 129.0) Basic endochitinase C... 0.03 Orthogroups_2024-Update
Mp7g04510.1 No alias CTL cellulose microfibrils and hemicellulose interaction protein 0.02 Orthogroups_2024-Update
PSME_00012569-RA No alias (p17514|chiq_tobac : 260.0) Acidic endochitinase Q... 0.03 Orthogroups_2024-Update
PSME_00050349-RA No alias (p52403|chi1_soltu : 337.0) Endochitinase 1 precursor... 0.04 Orthogroups_2024-Update
PSME_00053283-RA No alias (p51613|chib_vitvi : 425.0) Basic endochitinase... 0.04 Orthogroups_2024-Update
Potri.004G182000 No alias basic chitinase 0.02 Orthogroups_2024-Update
Potri.014G111800 No alias Chitinase family protein 0.02 Orthogroups_2024-Update
Potri.T175200 No alias basic chitinase 0.04 Orthogroups_2024-Update
Pp1s134_173V6 No alias chitinase 0.04 Orthogroups_2024-Update
Sobic.010G273600.1 No alias basic chitinase *(CHIB) 0.02 Orthogroups_2024-Update
Solyc02g061770 No alias chitinase 2 0.04 Orthogroups_2024-Update
Solyc02g082920 No alias acidic extracellular 26 kD chitinase 0.03 Orthogroups_2024-Update
Solyc10g055820 No alias Chitinase (AHRD V3.3 *** B9VRK7_CAPAN) 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004568 chitinase activity IEA InterProScan predictions
BP GO:0006032 chitin catabolic process IEA InterProScan predictions
BP GO:0016998 cell wall macromolecule catabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000726 Glyco_hydro_19_cat 29 260
No external refs found!