Sopen02g027900

Description : Ribonuclease E/G family

Gene families : OG_42_0007315 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007315_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen02g027900
Cluster	HCCA clusters: Cluster_46

Target	Alias	Description	ECC score	Gene Family Method
Bradi3g20650	No alias	RNAse E/G-like	0.02	Orthogroups_2024-Update
Glyma.02G223400	No alias	RNAse E/G-like	0.03	Orthogroups_2024-Update
Glyma.14G190200	No alias	RNAse E/G-like	0.04	Orthogroups_2024-Update
LOC_Os08g23430	No alias	starch binding domain containing protein, putative, expressed	0.02	Orthogroups_2024-Update
Mp7g15630.1	No alias	endoribonuclease (RNase E)	0.02	Orthogroups_2024-Update
Seita.6G112900.1	No alias	endoribonuclease *(RNase E)	0.03	Orthogroups_2024-Update
Sobic.003G290800.2	No alias	endoribonuclease *(RNase E)	0.03	Orthogroups_2024-Update
Solyc02g083140	No alias	ribonuclease E	0.05	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR019307	RNA-bd_AU-1/RNase_E/G	506	785

External Links

No external refs found!