Sopen02g029200

Description : Plus-3 domain

Gene families : OG_42_0000694 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000694_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen02g029200
Cluster	HCCA clusters: Cluster_253

Target	Alias	Description	ECC score	Gene Family Method	Actions
Bradi4g35977	No alias	nucleic acid binding;zinc ion binding;DNA binding	0.03	Orthogroups_2024-Update
Sobic.003G293200.1	No alias	protein factor (NERD) of non-canonical RdDM pathway	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	IEA	InterProScan predictions
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003121	SWIB_MDM2_domain	358	431
IPR004343	Plus-3_dom	494	597
IPR003169	GYF	812	850

External Links

No external refs found!