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  5. Sopen02g029420

Sopen02g029420


Description : Radical SAM superfamily


Gene families : OG_42_0006567 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006567_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen02g029420
Cluster HCCA clusters: Cluster_57

Target Alias Description ECC score Gene Family Method Actions
180500 No alias Methylthiotransferase 0.02 Orthogroups_2024-Update
A4A49_23391 No alias cdk5rap1-like protein 0.02 Orthogroups_2024-Update
Bradi4g14840 No alias Methylthiotransferase 0.04 Orthogroups_2024-Update
Cre11.g467633 No alias Methylthiotransferase 0.01 Orthogroups_2024-Update
Mp3g13110.1 No alias CDK5RAP1-like protein OS=Oryza sativa subsp. japonica... 0.02 Orthogroups_2024-Update
PSME_00051724-RA No alias (at4g36390 : 593.0) Methylthiotransferase; FUNCTIONS IN:... 0.03 Orthogroups_2024-Update
Pp1s25_71V6 No alias cdk5 regulatory subunit associated protein 1 0.04 Orthogroups_2024-Update
Seita.8G170600.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Sobic.005G169900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc02g084750 No alias Radical sam protein, putative (AHRD V3.3 *** B9S686_RICCO) 0.09 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA InterProScan predictions
MF GO:0051536 iron-sulfur cluster binding IEA InterProScan predictions
MF GO:0051539 4 iron, 4 sulfur cluster binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR007197 rSAM 272 469
IPR013848 Methylthiotransferase_N 112 224
IPR002792 TRAM_dom 524 598
No external refs found!