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  5. Sopen02g029820

Sopen02g029820


Description : Tub family


Gene families : OG_42_0000271 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000271_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen02g029820
Cluster HCCA clusters: Cluster_356

Target Alias Description ECC score Gene Family Method Actions
At2g18280 No alias Tubby-like F-box protein [Source:UniProtKB/TrEMBL;Acc:B9DGB6] 0.02 Orthogroups_2024-Update
GRMZM5G866954 No alias tubby like protein 10 0.03 Orthogroups_2024-Update
Glyma.07G251800 No alias tubby like protein 3 0.03 Orthogroups_2024-Update
PSME_00050201-RA No alias (at1g25280 : 451.0) Member of TLP family; tubby like... 0.04 Orthogroups_2024-Update
Potri.005G121600 No alias tubby like protein 2 0.06 Orthogroups_2024-Update
Potri.007G023432 No alias tubby like protein 2 0.03 Orthogroups_2024-Update
Sobic.009G152200.1 No alias TUB-type transcription factor 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001810 F-box_dom 53 105
IPR000007 Tubby_C 116 406
No external refs found!