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  5. Sopen02g031020

Sopen02g031020


Description : PB1 domain


Gene families : OG_42_0000314 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000314_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen02g031020
Cluster HCCA clusters: Cluster_398

Target Alias Description ECC score Gene Family Method Actions
A4A49_06372 No alias hypothetical protein 0.03 Orthogroups_2024-Update
A4A49_08561 No alias hypothetical protein 0.02 Orthogroups_2024-Update
Brara.B02647.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Glyma.07G097900 No alias Octicosapeptide/Phox/Bem1p family protein 0.02 Orthogroups_2024-Update
Glyma.09G180100 No alias Octicosapeptide/Phox/Bem1p family protein 0.02 Orthogroups_2024-Update
Glyma.20G121100 No alias Octicosapeptide/Phox/Bem1p family protein 0.05 Orthogroups_2024-Update
LOC_Os01g04650 No alias PB1 domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os02g52790 No alias PB1 domain containing protein, expressed 0.02 Orthogroups_2024-Update
MA_10426590g0010 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
MA_94930g0010 No alias (at3g26510 : 122.0) Octicosapeptide/Phox/Bem1p family... 0.03 Orthogroups_2024-Update
Potri.003G006200 No alias Octicosapeptide/Phox/Bem1p family protein 0.02 Orthogroups_2024-Update
Potri.004G095600 No alias Octicosapeptide/Phox/Bem1p family protein 0.04 Orthogroups_2024-Update
Potri.008G124700 No alias Octicosapeptide/Phox/Bem1p family protein 0.03 Orthogroups_2024-Update
Potri.008G186500 No alias Octicosapeptide/Phox/Bem1p family protein 0.02 Orthogroups_2024-Update
Potri.011G041100 No alias Octicosapeptide/Phox/Bem1p family protein 0.02 Orthogroups_2024-Update
Seita.8G111900.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000270 PB1_dom 47 135
No external refs found!