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  5. Sopen02g032330

Sopen02g032330


Description : PPR repeat family


Gene families : OG_42_0008364 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0008364_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen02g032330
Cluster HCCA clusters: Cluster_148

Target Alias Description ECC score Gene Family Method Actions
HORVU3Hr1G087540.1 No alias plastidial splicing factor *(PDM3) 0.02 Orthogroups_2024-Update
Solyc02g087560 No alias Pentatricopeptide repeat-containing protein (AHRD V3.3... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 570 595
IPR002885 Pentatricopeptide_repeat 534 559
IPR002885 Pentatricopeptide_repeat 464 491
IPR002885 Pentatricopeptide_repeat 322 366
IPR002885 Pentatricopeptide_repeat 146 192
IPR002885 Pentatricopeptide_repeat 392 435
IPR002885 Pentatricopeptide_repeat 251 297
No external refs found!