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  5. Sopen02g033260

Sopen02g033260


Description : SpoU rRNA Methylase family


Gene families : OG_42_0005172 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005172_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Solanum release: Sopen02g033260
Cluster HCCA clusters: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
119049 No alias tRNA/rRNA methyltransferase (SpoU) family protein 0.01 Orthogroups_2024-Update
Bradi1g22607 No alias tRNA/rRNA methyltransferase (SpoU) family protein 0.01 Orthogroups_2024-Update
Cre09.g392950 No alias tRNA/rRNA methyltransferase (SpoU) family protein 0.02 Orthogroups_2024-Update
Glyma.08G241400 No alias tRNA/rRNA methyltransferase (SpoU) family protein 0.02 Orthogroups_2024-Update
LOC_Os07g40700 No alias RNA methyltransferase, TrmH family protein, putative, expressed 0.02 Orthogroups_2024-Update
Potri.004G122300 No alias tRNA/rRNA methyltransferase (SpoU) family protein 0.05 Orthogroups_2024-Update
Sobic.002G363500.2 No alias TrmH-type tRNA methyltransferase 0.03 Orthogroups_2024-Update
Solyc02g088540 No alias TRNA/rRNA methyltransferase family protein (AHRD V3.3... 0.03 Orthogroups_2024-Update
evm.model.tig00000821.22 No alias no hits & (original description: no original description) 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA InterProScan predictions
BP GO:0006396 RNA processing IEA InterProScan predictions
MF GO:0008173 RNA methyltransferase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001537 SpoU_MeTrfase 172 313
No external refs found!