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  5. Sopen02g033280

Sopen02g033280


Description : Cyclic nucleotide-binding domain


Gene families : OG_42_0000108 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000108_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen02g033280
Cluster HCCA clusters: Cluster_145

Target Alias Description ECC score Gene Family Method Actions
A4A49_22015 No alias putative cyclic nucleotide-gated ion channel 15 0.03 Orthogroups_2024-Update
A4A49_24346 No alias cyclic nucleotide-gated ion channel 2 0.03 Orthogroups_2024-Update
At1g19780 No alias Putative cyclic nucleotide-gated ion channel 8... 0.04 Orthogroups_2024-Update
At2g24610 No alias cyclic nucleotide-gated channel 14 [Source:TAIR;Acc:AT2G24610] 0.03 Orthogroups_2024-Update
At5g57940 No alias Probable cyclic nucleotide-gated ion channel 5... 0.04 Orthogroups_2024-Update
Bradi3g57510 No alias cyclic nucleotide-binding transporter 1 0.02 Orthogroups_2024-Update
Brara.A02980.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.03 Orthogroups_2024-Update
Brara.B01426.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.03 Orthogroups_2024-Update
Brara.D01434.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.02 Orthogroups_2024-Update
Brara.E02422.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.02 Orthogroups_2024-Update
GRMZM2G074317 No alias Cyclic nucleotide-regulated ion channel family protein 0.02 Orthogroups_2024-Update
Glyma.03G257000 No alias cyclic nucleotide gated channel 1 0.03 Orthogroups_2024-Update
Glyma.09G168500 No alias cyclic nucleotide-binding transporter 1 0.02 Orthogroups_2024-Update
Glyma.09G168700 No alias cyclic nucleotide-binding transporter 1 0.03 Orthogroups_2024-Update
Glyma.12G133700 No alias cyclic nucleotide-gated cation channel 4 0.06 Orthogroups_2024-Update
Kfl00018_0440 kfl00018_0440_v1.1 (at4g30360 : 523.0) member of Cyclic nucleotide gated... 0.02 Orthogroups_2024-Update
MA_446575g0010 No alias (at2g28260 : 388.0) member of Cyclic nucleotide gated... 0.02 Orthogroups_2024-Update
Mp3g14660.1 No alias cyclic nucleotide-gated cation channel (CNGC) 0.02 Orthogroups_2024-Update
PSME_00037092-RA No alias (at5g54250 : 808.0) member of Cyclic nucleotide gated... 0.03 Orthogroups_2024-Update
Potri.001G407800 No alias cyclic nucleotide-gated cation channel 4 0.04 Orthogroups_2024-Update
Potri.002G170000 No alias cyclic nucleotide gated channel 10 0.02 Orthogroups_2024-Update
Potri.004G212300 No alias cyclic nucleotide-gated channel 15 0.02 Orthogroups_2024-Update
Potri.015G033900 No alias cyclic nucleotide-binding transporter 1 0.04 Orthogroups_2024-Update
Potri.017G067000 No alias cyclic nucleotide-gated channel 16 0.03 Orthogroups_2024-Update
Pp1s204_120V6 No alias MKP6.28; cyclic nucleotide-binding transporter 1 / CNBT1... 0.03 Orthogroups_2024-Update
Seita.1G240900.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.03 Orthogroups_2024-Update
Seita.3G390700.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.02 Orthogroups_2024-Update
Seita.9G156700.1 No alias cyclic nucleotide-gated cation channel *(CNGC) 0.03 Orthogroups_2024-Update
Solyc09g007840 No alias Cyclic nucleotide-gated channel (AHRD V3.3 *** A0A0K9PRG4_ZOSMR) 0.03 Orthogroups_2024-Update
Solyc12g010010 No alias Cyclic nucleotide-gated ion channel, putative (AHRD V3.3... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005216 ion channel activity IEA InterProScan predictions
BP GO:0006811 ion transport IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000595 cNMP-bd_dom 541 628
IPR005821 Ion_trans_dom 116 439
No external refs found!