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  5. Solyc02g011990

Solyc02g011990


Description : Photosystem II protein D1 (AHRD V3.3 *** F1KC16_9ASTE)


Gene families : OG_42_0001749 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001749_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc02g011990
Cluster HCCA clusters: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
236852 No alias photosystem II reaction center protein A 0.04 Orthogroups_2024-Update
Bradi4g19720 No alias photosystem II reaction center protein A 0.06 Orthogroups_2024-Update
Bradi5g10967 No alias photosystem II reaction center protein A 0.06 Orthogroups_2024-Update
Brara.B03183.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU1Hr1G017870.1 No alias Unknown function 0.06 Orthogroups_2024-Update
HORVU2Hr1G062060.1 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU2Hr1G121820.5 No alias component *(PsbA/D1) of PS-II reaction center complex 0.04 Orthogroups_2024-Update
HORVU3Hr1G004790.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Mp3g12650.1 No alias Photosystem II protein D1 OS=Marchantia polymorpha... 0.03 Orthogroups_2024-Update
Mp8g01990.1 No alias no hits & (original description: none) 0.05 Orthogroups_2024-Update
PSME_00003759-RA No alias (p69551|psba_pinth : 308.0) Photosystem Q(B) protein (32... 0.05 Orthogroups_2024-Update
PSME_00021857-RA No alias (p69551|psba_pinth : 509.0) Photosystem Q(B) protein (32... 0.05 Orthogroups_2024-Update
Seita.J017900.1 No alias component *(PsbA/D1) of PS-II reaction center complex 0.06 Orthogroups_2024-Update
Sopen01g008050 No alias Photosynthetic reaction centre protein 0.11 Orthogroups_2024-Update
Sopen02g002740 No alias Photosynthetic reaction centre protein 0.13 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0009772 photosynthetic electron transport in photosystem II IEA InterProScan predictions
BP GO:0019684 photosynthesis, light reaction IEA InterProScan predictions
MF GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004867 serine-type endopeptidase inhibitor activity IEP Predicted GO
CC GO:0005743 mitochondrial inner membrane IEP Predicted GO
CC GO:0005750 mitochondrial respiratory chain complex III IEP Predicted GO
BP GO:0006122 mitochondrial electron transport, ubiquinol to cytochrome c IEP Predicted GO
CC GO:0009521 photosystem IEP Predicted GO
CC GO:0009522 photosystem I IEP Predicted GO
CC GO:0009579 thylakoid IEP Predicted GO
BP GO:0009611 response to wounding IEP Predicted GO
BP GO:0015979 photosynthesis IEP Predicted GO
MF GO:0016168 chlorophyll binding IEP Predicted GO
CC GO:0019866 organelle inner membrane IEP Predicted GO
BP GO:0022904 respiratory electron transport chain IEP Predicted GO
CC GO:0031090 organelle membrane IEP Predicted GO
CC GO:0031966 mitochondrial membrane IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044436 thylakoid part IEP Predicted GO
CC GO:0044455 mitochondrial membrane part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
CC GO:0045275 respiratory chain complex III IEP Predicted GO
CC GO:0070069 cytochrome complex IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
CC GO:0098798 mitochondrial protein complex IEP Predicted GO
CC GO:0098800 inner mitochondrial membrane protein complex IEP Predicted GO
CC GO:0098803 respiratory chain complex IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR000484 Photo_RC_L/M 87 152
IPR000484 Photo_RC_L/M 166 225
No external refs found!