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  5. Sopen02g034840

Sopen02g034840


Description : WD domain, G-beta repeat


Gene families : OG_42_0000343 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000343_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen02g034840
Cluster HCCA clusters: Cluster_331

Target Alias Description ECC score Gene Family Method Actions
Bradi4g02925 No alias Transducin/WD40 repeat-like superfamily protein 0.02 Orthogroups_2024-Update
Brara.C04314.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.I03394.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Glyma.11G123000 No alias Transducin/WD40 repeat-like superfamily protein 0.04 Orthogroups_2024-Update
Glyma.17G246400 No alias Transducin/WD40 repeat-like superfamily protein 0.04 Orthogroups_2024-Update
MA_10429180g0010 No alias (at1g24130 : 233.0) Transducin/WD40 repeat-like... 0.02 Orthogroups_2024-Update
MA_137730g0010 No alias (at1g49450 : 217.0) Transducin/WD40 repeat-like... 0.02 Orthogroups_2024-Update
Potri.003G202700 No alias Transducin/WD40 repeat-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.015G070900 No alias Transducin/WD40 repeat-like superfamily protein 0.02 Orthogroups_2024-Update
Solyc04g005020 No alias Transducin/WD40 repeat-like superfamily protein (AHRD... 0.03 Orthogroups_2024-Update
Sopen03g032900 No alias WD domain, G-beta repeat 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001680 WD40_repeat 207 236
IPR001680 WD40_repeat 299 325
IPR001680 WD40_repeat 375 418
IPR001680 WD40_repeat 99 125
IPR001680 WD40_repeat 335 367
IPR001680 WD40_repeat 242 277
No external refs found!