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  5. Sopen02g035000

Sopen02g035000


Description : Dof domain, zinc finger


Gene families : OG_42_0000027 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen02g035000
Cluster HCCA clusters: Cluster_386

Target Alias Description ECC score Gene Family Method Actions
29617 No alias Dof-type zinc finger DNA-binding family protein 0.02 Orthogroups_2024-Update
A4A49_04752 No alias dof zinc finger protein dof3.5 0.03 Orthogroups_2024-Update
A4A49_28483 No alias dof zinc finger protein dof5.7 0.03 Orthogroups_2024-Update
Bradi1g15420 No alias Dof-type zinc finger DNA-binding family protein 0.02 Orthogroups_2024-Update
Bradi4g04260 No alias OBF-binding protein 3 0.02 Orthogroups_2024-Update
Brara.C01888.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Brara.F01753.1 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
Brara.I01305.1 No alias transcription factor *(DOF) 0.02 Orthogroups_2024-Update
Brara.K00739.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Glyma.16G022900 No alias Dof-type zinc finger DNA-binding family protein 0.03 Orthogroups_2024-Update
Glyma.19G118000 No alias cycling DOF factor 3 0.02 Orthogroups_2024-Update
MA_83624g0010 No alias (at5g60200 : 114.0) Encodes a Dof-type transcription... 0.03 Orthogroups_2024-Update
MA_97259g0020 No alias (at5g62430 : 134.0) Dof-type zinc finger... 0.03 Orthogroups_2024-Update
Potri.004G038800 No alias OBF binding protein 4 0.03 Orthogroups_2024-Update
Potri.011G047500 No alias OBF binding protein 4 0.03 Orthogroups_2024-Update
Sobic.001G420300.1 No alias transcription factor *(DOF) 0.03 Orthogroups_2024-Update
Solyc02g090310 No alias Dof zinc finger protein (AHRD V3.3 *-* W9QGW0_9ROSA) 0.04 Orthogroups_2024-Update
Solyc03g082840 No alias Dof zinc finger protein (AHRD V3.3 *** A0A068PXR9_TOBAC) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR003851 Znf_Dof 53 108
No external refs found!