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  5. Solyc02g014150

Solyc02g014150


Description : Photosystem II stability/assembly factor HCF136 (AHRD V3.3 *** G7JPH8_MEDTR)


Gene families : OG_42_0006109 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006109_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc02g014150
Cluster HCCA clusters: Cluster_183

Target Alias Description ECC score Gene Family Method Actions
Glyma.11G100800 No alias photosystem II stability/assembly factor, chloroplast (HCF136) 0.05 Orthogroups_2024-Update
Glyma.12G026900 No alias photosystem II stability/assembly factor, chloroplast (HCF136) 0.03 Orthogroups_2024-Update
HORVU7Hr1G120190.6 No alias protein involved in PS-II assembly *(HCF136) 0.03 Orthogroups_2024-Update
Kfl00307_0040 kfl00307_0040_v1.... (at5g23120 : 469.0) encodes a stability and/or assembly... 0.03 Orthogroups_2024-Update
Mp4g23900.1 No alias HCF136 protein involved in PS-II assembly 0.06 Orthogroups_2024-Update
Potri.007G071300 No alias photosystem II stability/assembly factor, chloroplast (HCF136) 0.05 Orthogroups_2024-Update
Pp1s189_18V6 No alias photosystem ii stability assembly factor hcf136 0.02 Orthogroups_2024-Update
Seita.4G289700.1 No alias protein involved in PS-II assembly *(HCF136) 0.04 Orthogroups_2024-Update
Sobic.010G277600.1 No alias protein involved in PS-II assembly *(HCF136) 0.02 Orthogroups_2024-Update
Sopen02g003530 No alias Photosynthesis system II assembly factor YCF48 0.07 Orthogroups_2024-Update
evm.model.contig_2301.8 No alias (at5g23120 : 322.0) encodes a stability and/or assembly... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004807 triose-phosphate isomerase activity IEP Predicted GO
CC GO:0005779 integral component of peroxisomal membrane IEP Predicted GO
BP GO:0006790 sulfur compound metabolic process IEP Predicted GO
BP GO:0006801 superoxide metabolic process IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
BP GO:0016043 cellular component organization IEP Predicted GO
BP GO:0016226 iron-sulfur cluster assembly IEP Predicted GO
BP GO:0016559 peroxisome fission IEP Predicted GO
MF GO:0016860 intramolecular oxidoreductase activity IEP Predicted GO
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
BP GO:0031163 metallo-sulfur cluster assembly IEP Predicted GO
CC GO:0031231 intrinsic component of peroxisomal membrane IEP Predicted GO
CC GO:0031300 intrinsic component of organelle membrane IEP Predicted GO
CC GO:0031301 integral component of organelle membrane IEP Predicted GO
CC GO:0044438 microbody part IEP Predicted GO
CC GO:0044439 peroxisomal part IEP Predicted GO
BP GO:0048285 organelle fission IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
BP GO:0072593 reactive oxygen species metabolic process IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR028203 PSII_CF48-like_dom 85 386
No external refs found!