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  5. Solyc02g014220

Solyc02g014220


Description : Endoglucanase (AHRD V3.3 *** K4B4M1_SOLLC)


Gene families : OG_42_0000077 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000077_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc02g014220
Cluster HCCA clusters: Cluster_303

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G147422 No alias glycosyl hydrolase 9B7 0.02 Orthogroups_2024-Update
GRMZM2G331566 No alias glycosyl hydrolase 9B13 0.02 Orthogroups_2024-Update
GRMZM2G455642 No alias glycosyl hydrolase 9B1 0.02 Orthogroups_2024-Update
LOC_Os02g50040 No alias endoglucanase, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g13830 No alias endoglucanase, putative, expressed 0.02 Orthogroups_2024-Update
MA_10430521g0010 No alias (at3g43860 : 535.0) glycosyl hydrolase 9A4 (GH9A4);... 0.03 Orthogroups_2024-Update
MA_697188g0010 No alias (at4g02290 : 427.0) glycosyl hydrolase 9B13 (GH9B13);... 0.02 Orthogroups_2024-Update
PSME_00016573-RA No alias (at3g43860 : 521.0) glycosyl hydrolase 9A4 (GH9A4);... 0.03 Orthogroups_2024-Update
Pp1s100_137V6 No alias endo- -beta- 0.03 Orthogroups_2024-Update
Pp1s19_105V6 No alias endo-beta- -glucanase 0.02 Orthogroups_2024-Update
Sopen09g004950 No alias Glycosyl hydrolase family 9 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
MF GO:0030246 carbohydrate binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0009507 chloroplast IEP Predicted GO
CC GO:0009536 plastid IEP Predicted GO
BP GO:0009790 embryo development IEP Predicted GO
BP GO:0010109 regulation of photosynthesis IEP Predicted GO
BP GO:0042548 regulation of photosynthesis, light reaction IEP Predicted GO
BP GO:0042549 photosystem II stabilization IEP Predicted GO
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP Predicted GO
InterPro domains Description Start Stop
IPR001701 Glyco_hydro_9 29 487
IPR019028 CBM_49 541 619
No external refs found!