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  5. Sopen02g038250

Sopen02g038250


Description : PPR repeat family


Gene families : OG_42_0008587 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0008587_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Solanum release: Sopen02g038250
Cluster HCCA clusters: Cluster_92

Target Alias Description ECC score Gene Family Method Actions
A4A49_28411 No alias pentatricopeptide repeat-containing protein 0.05 Orthogroups_2024-Update
GRMZM2G056116 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.02 Orthogroups_2024-Update
LOC_Os12g18640 No alias pentatricopeptide, putative, expressed 0.03 Orthogroups_2024-Update
Seita.3G308800.1 No alias psbJ/psbN-translation activator *(LPE1) 0.05 Orthogroups_2024-Update
Sobic.010G249700.1 No alias psbJ/psbN-translation activator *(LPE1) 0.06 Orthogroups_2024-Update
Solyc02g093620 No alias Pentatricopeptide repeat-containing family protein (AHRD... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 185 206
IPR002885 Pentatricopeptide_repeat 227 256
IPR002885 Pentatricopeptide_repeat 258 302
IPR002885 Pentatricopeptide_repeat 602 651
IPR002885 Pentatricopeptide_repeat 485 544
No external refs found!