Sopen03g001590

Description : Regulator of chromosome condensation (RCC1) repeat

Gene families : OG_42_0000452 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000452_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen03g001590
Cluster	HCCA clusters: Cluster_275

Target	Alias	Description	ECC score	Gene Family Method	Actions
Sopen00g013970	No alias	hypothetical protein	0.03	Orthogroups_2024-Update
Sopen03g035290	No alias	Regulator of chromosome condensation (RCC1) repeat	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	IEA	InterProScan predictions

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000408	Reg_chr_condens	384	433
IPR000408	Reg_chr_condens	278	326
IPR000408	Reg_chr_condens	330	380
IPR000408	Reg_chr_condens	498	547
IPR000408	Reg_chr_condens	552	598
IPR000408	Reg_chr_condens	449	493
IPR027988	BRX_N	864	897
IPR000306	Znf_FYVE	603	669
IPR013591	Brevis_radix_dom	992	1046

External Links

No external refs found!