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  5. Sopen03g002330

Sopen03g002330


Description : AP2 domain


Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen03g002330
Cluster HCCA clusters: Cluster_277

Target Alias Description ECC score Gene Family Method Actions
A4A49_06467 No alias ethylene-responsive transcription factor crf4 0.03 Orthogroups_2024-Update
A4A49_20188 No alias ethylene-responsive transcription factor erf062 0.02 Orthogroups_2024-Update
A4A49_33000 No alias ethylene-responsive transcription factor 14 0.02 Orthogroups_2024-Update
Brara.C01595.1 No alias subgroup ERF-IX transcription factor 0.02 Orthogroups_2024-Update
Brara.F02347.1 No alias subgroup ERF-X transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G080516 No alias ethylene responsive element binding factor 1 0.02 Orthogroups_2024-Update
Glyma.02G006200 No alias ethylene response factor 1 0.02 Orthogroups_2024-Update
Glyma.15G152000 No alias ethylene-responsive element binding protein 0.03 Orthogroups_2024-Update
HORVU2Hr1G094780.2 No alias Unknown function 0.03 Orthogroups_2024-Update
HORVU7Hr1G026940.1 No alias subgroup ERF-II-DEAR transcription factor 0.02 Orthogroups_2024-Update
LOC_Os06g09717 No alias ethylene-responsive transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g40150 No alias AP2 domain containing protein, expressed 0.03 Orthogroups_2024-Update
MA_7202656g0010 No alias (at1g74930 : 83.6) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
PSME_00004892-RA No alias (at1g19210 : 123.0) encodes a member of the DREB... 0.02 Orthogroups_2024-Update
PSME_00021283-RA No alias (at5g21960 : 119.0) encodes a member of the DREB... 0.02 Orthogroups_2024-Update
Seita.1G196400.1 No alias subgroup ERF-III transcription factor 0.02 Orthogroups_2024-Update
Seita.1G330800.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.7G081300.1 No alias subgroup ERF-VIII transcription factor 0.02 Orthogroups_2024-Update
Seita.7G205200.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.9G500100.1 No alias subgroup ERF-IX transcription factor 0.02 Orthogroups_2024-Update
Solyc02g090770 No alias Ethylene-responsive transcription factor (AHRD V3.3 *-*... 0.03 Orthogroups_2024-Update
Solyc03g007460 No alias Solanum lycopersicum Cytokinin Response Factor 4 0.03 Orthogroups_2024-Update
Solyc03g117130 No alias Ethylene-responsive transcription factor (AHRD V3.3 ***... 0.02 Orthogroups_2024-Update
Solyc03g124110 No alias CBF 0.04 Orthogroups_2024-Update
Solyc12g005960 No alias Ethylene-responsive transcription factor, putative (AHRD... 0.04 Orthogroups_2024-Update
Sopen01g027380 No alias AP2 domain 0.03 Orthogroups_2024-Update
Sopen05g029310 No alias AP2 domain 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 23 72
No external refs found!