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  5. Sopen03g002700

Sopen03g002700


Description : Berberine and berberine like


Gene families : OG_42_0000069 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000069_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen03g002700
Cluster HCCA clusters: Cluster_255

Target Alias Description ECC score Gene Family Method Actions
A4A49_00769 No alias reticuline oxidase-like protein 0.03 Orthogroups_2024-Update
A4A49_21422 No alias reticuline oxidase-like protein 0.02 Orthogroups_2024-Update
A4A49_37478 No alias flavin-dependent oxidoreductase fox2 0.03 Orthogroups_2024-Update
AC203909.3_FG007 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
At1g11770 No alias Berberine bridge enzyme-like 2... 0.04 Orthogroups_2024-Update
At4g20840 No alias Berberine bridge enzyme-like 21... 0.02 Orthogroups_2024-Update
Bradi1g38250 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Brara.E00947.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.04 Orthogroups_2024-Update
Brara.I05161.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.03 Orthogroups_2024-Update
Glyma.04G113400 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Glyma.05G125800 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Glyma.08G059000 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Glyma.08G080100 No alias FAD-binding Berberine family protein 0.04 Orthogroups_2024-Update
Glyma.08G080500 No alias FAD-binding Berberine family protein 0.02 Orthogroups_2024-Update
Glyma.15G133200 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
HORVU5Hr1G072520.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.02 Orthogroups_2024-Update
HORVU7Hr1G093940.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.04 Orthogroups_2024-Update
MA_132990g0010 No alias (at4g20860 : 342.0) FAD-binding Berberine family... 0.02 Orthogroups_2024-Update
MA_613919g0010 No alias (at5g44390 : 411.0) FAD-binding Berberine family... 0.02 Orthogroups_2024-Update
PSME_00002246-RA No alias (at5g44400 : 385.0) FAD-binding Berberine family... 0.02 Orthogroups_2024-Update
PSME_00002247-RA No alias (at5g44400 : 388.0) FAD-binding Berberine family... 0.02 Orthogroups_2024-Update
PSME_00030437-RA No alias (at2g34810 : 230.0) FAD-binding Berberine family... 0.04 Orthogroups_2024-Update
PSME_00036068-RA No alias (at1g30760 : 377.0) FAD-binding Berberine family... 0.03 Orthogroups_2024-Update
Potri.001G440700 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Potri.001G459500 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Potri.011G158600 No alias FAD-binding Berberine family protein 0.02 Orthogroups_2024-Update
Potri.011G162800 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Potri.011G162900 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Solyc02g070070 No alias FAD-binding Berberine family protein (AHRD V3.3 *** AT2G34790.1) 0.03 Orthogroups_2024-Update
Sopen02g024290 No alias FAD binding domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA InterProScan predictions
MF GO:0050660 flavin adenine dinucleotide binding IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR012951 BBE 108 156
No external refs found!