1. Home
  2. Species
  3. Solanum pennellii
  4. Sequence
  5. Sopen03g003370

Sopen03g003370


Description : Helix-loop-helix DNA-binding domain


Gene families : OG_42_0000286 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000286_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen03g003370
Cluster HCCA clusters: Cluster_274

Target Alias Description ECC score Gene Family Method Actions
At3g61950 No alias Transcription factor bHLH67... 0.03 Orthogroups_2024-Update
Brara.G01000.1 No alias bHLH-type transcription factor 0.02 Orthogroups_2024-Update
Potri.007G097600 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Sobic.006G197500.1 No alias bHLH-type transcription factor 0.02 Orthogroups_2024-Update
Solyc09g091760 No alias bHLH transcription factor 151 0.03 Orthogroups_2024-Update
Solyc12g087850 No alias Basic helix-loop-helix transcription factor (AHRD V3.3... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011598 bHLH_dom 100 150
No external refs found!