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  5. Sopen03g003550

Sopen03g003550


Description : hypothetical protein


Gene families : OG_42_0003135 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003135_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen03g003550
Cluster HCCA clusters: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
A4A49_24333 No alias pentatricopeptide repeat-containing protein 0.04 Orthogroups_2024-Update
At4g21190 No alias Pentatricopeptide repeat-containing protein At4g21190... 0.03 Orthogroups_2024-Update
Glyma.15G089500 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
Glyma.16G177300 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.07 Orthogroups_2024-Update
Seita.2G343800.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc03g007600 No alias Pentatricopeptide repeat-containing protein (AHRD V3.3... 0.1 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 130 151
IPR002885 Pentatricopeptide_repeat 167 192
No external refs found!