Sopen03g004850

Description : HSF-type DNA-binding

Gene families : OG_42_0000092 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000092_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen03g004850
Cluster	HCCA clusters: Cluster_129

Target	Alias	Description	ECC score	Gene Family Method
93081	No alias	heat shock transcription factor A1D	0.02	Orthogroups_2024-Update
A4A49_08622	No alias	heat stress transcription factor b-4	0.02	Orthogroups_2024-Update
A4A49_17016	No alias	heat stress transcription factor a-4a	0.03	Orthogroups_2024-Update
At3g24520	No alias	Heat stress transcription factor C-1...	0.04	Orthogroups_2024-Update
At5g54070	No alias	Heat stress transcription factor A-9...	0.03	Orthogroups_2024-Update
Brara.I02617.1	No alias	transcriptional regulator *(HsfA1) & HSF-type...	0.03	Orthogroups_2024-Update
Brara.K01279.1	No alias	HSF-type transcription factor	0.03	Orthogroups_2024-Update
GRMZM2G301485	No alias	heat shock transcription factor B2A	0.03	Orthogroups_2024-Update
Glyma.05G240500	No alias	heat shock transcription factor A8	0.02	Orthogroups_2024-Update
Glyma.15G086400	No alias	heat shock transcription factor A4A	0.03	Orthogroups_2024-Update
HORVU5Hr1G068320.2	No alias	HSF-type transcription factor	0.03	Orthogroups_2024-Update
LOC_Os02g13800	No alias	HSF-type DNA-binding domain containing protein, expressed	0.03	Orthogroups_2024-Update
LOC_Os03g06630	No alias	heat stress transcription factor, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os04g48030	No alias	heat stress transcription factor B-1, putative, expressed	0.04	Orthogroups_2024-Update
LOC_Os08g36700	No alias	HSF-type DNA-binding domain containing protein, expressed	0.02	Orthogroups_2024-Update
LOC_Os09g28200	No alias	HSF-type DNA-binding domain containing protein, expressed	0.02	Orthogroups_2024-Update
MA_110587g0010	No alias	(at1g46264 : 202.0) Encodes SCHIZORIZA, a member of Heat...	0.03	Orthogroups_2024-Update
MA_5374g0010	No alias	(at1g46264 : 191.0) Encodes SCHIZORIZA, a member of Heat...	0.03	Orthogroups_2024-Update
MA_8992661g0010	No alias	(at1g46264 : 182.0) Encodes SCHIZORIZA, a member of Heat...	0.02	Orthogroups_2024-Update
Pp1s19_153V6	No alias	heat shock transcription factor	0.02	Orthogroups_2024-Update
Seita.5G318300.1	No alias	HSF-type transcription factor	0.03	Orthogroups_2024-Update
Sobic.001G243000.1	No alias	HSF-type transcription factor	0.02	Orthogroups_2024-Update
Sobic.004G101400.1	No alias	HSF-type transcription factor	0.04	Orthogroups_2024-Update
Solyc07g040680	No alias	SolycHsfA9	0.03	Orthogroups_2024-Update
Solyc11g064990	No alias	SolycHsfB4b	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	InterProScan predictions
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	InterProScan predictions
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR000232	HSF_DNA-bd	26	115

External Links

No external refs found!

Sopen03g004850

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation