Description : RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
Gene families : OG_42_0001097 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001097_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Solanum release: Sopen03g005120 | |
Cluster | HCCA clusters: Cluster_361 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
A4A49_09436 | No alias | serinearginine-rich splicing factor rs41 | 0.03 | Orthogroups_2024-Update | |
Bradi5g01430 | No alias | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.02 | Orthogroups_2024-Update | |
PSME_00001274-RA | No alias | (at4g25500 : 298.0) encodes an arginine/serine-rich... | 0.02 | Orthogroups_2024-Update | |
PSME_00001279-RA | No alias | (at4g25500 : 278.0) encodes an arginine/serine-rich... | 0.02 | Orthogroups_2024-Update | |
PSME_00035961-RA | No alias | (at4g25500 : 255.0) encodes an arginine/serine-rich... | 0.02 | Orthogroups_2024-Update | |
Potri.002G175000 | No alias | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.02 | Orthogroups_2024-Update | |
Pp1s144_89V6 | No alias | arginine serine-rich splicing factor rsp41 | 0.03 | Orthogroups_2024-Update | |
Seita.9G568700.1 | No alias | RNA splicing factor *(RS31/40/41) | 0.02 | Orthogroups_2024-Update | |
Sobic.004G020700.1 | No alias | RNA splicing factor *(RS31/40/41) | 0.01 | Orthogroups_2024-Update | |
Solyc01g091750 | No alias | Arginine/serine-rich splicing factor (AHRD V3.3 *** D8L816_9POAL) | 0.03 | Orthogroups_2024-Update | |
Solyc03g026240 | No alias | Arginine/serine-rich splicing factor, putative (AHRD... | 0.06 | Orthogroups_2024-Update | |
Solyc11g072340 | No alias | Arginine/serine-rich splicing factor RSP41, putative... | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003676 | nucleic acid binding | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No Predicted GO terms available for this sequence |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR000504 | RRM_dom | 55 | 117 |
No external refs found! |