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  5. Solyc02g020960

Solyc02g020960


Description : Photosystem I P700 chlorophyll a apoprotein A1 (AHRD V3.3 *** PSAA_ATRBE)


Gene families : OG_42_0000633 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000633_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc02g020960
Cluster HCCA clusters: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
236842 No alias Photosystem I, PsaA/PsaB protein 0.04 Orthogroups_2024-Update
Bradi1g39223 No alias Photosystem I, PsaA/PsaB protein 0.07 Orthogroups_2024-Update
HORVU6Hr1G049190.1 No alias apoprotein PsaB of PS-I complex 0.06 Orthogroups_2024-Update
HORVU6Hr1G049200.2 No alias apoprotein PsaA of PS-I complex 0.05 Orthogroups_2024-Update
LOC_Os05g01675 No alias photosystem I P700 chlorophyll a apoprotein A1,... 0.02 Orthogroups_2024-Update
LOC_Os10g38234 No alias photosystem I P700 chlorophyll a apoprotein A2,... 0.03 Orthogroups_2024-Update
PSME_00000991-RA No alias (q85wx0|psab_pinko : 713.0) Photosystem I P700... 0.05 Orthogroups_2024-Update
PSME_00007865-RA No alias (p41640|psab_pinth : 787.0) Photosystem I P700... 0.06 Orthogroups_2024-Update
PSME_00023392-RA No alias (p41640|psab_pinth : 254.0) Photosystem I P700... 0.03 Orthogroups_2024-Update
PSME_00023812-RA No alias (p58386|psab_wheat : 347.0) Photosystem I P700... 0.06 Orthogroups_2024-Update
Potri.003G065200 No alias Photosystem I, PsaA/PsaB protein 0.02 Orthogroups_2024-Update
Potri.013G141800 No alias Photosystem I, PsaA/PsaB protein 0.03 Orthogroups_2024-Update
Potri.017G052700 No alias Photosystem I, PsaA/PsaB protein 0.03 Orthogroups_2024-Update
Potri.019G028100 No alias Photosystem I, PsaA/PsaB protein 0.02 Orthogroups_2024-Update
Seita.J011100.1 No alias apoprotein PsaA of PS-I complex 0.06 Orthogroups_2024-Update
Seita.J019800.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Sobic.008G120266.1 No alias Unknown function 0.06 Orthogroups_2024-Update
Sopen05g013540 No alias Photosystem I psaA/psaB protein 0.03 Orthogroups_2024-Update
Sopen12g014090 No alias Photosystem I psaA/psaB protein 0.03 Orthogroups_2024-Update
Sopen12g014130 No alias Photosystem I psaA/psaB protein 0.02 Orthogroups_2024-Update
Sopen12g014140 No alias Photosystem I psaA/psaB protein 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0009522 photosystem I IEA InterProScan predictions
CC GO:0009579 thylakoid IEA InterProScan predictions
BP GO:0015979 photosynthesis IEA InterProScan predictions
CC GO:0016021 integral component of membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Predicted GO
CC GO:0005758 mitochondrial intermembrane space IEP Predicted GO
BP GO:0006091 generation of precursor metabolites and energy IEP Predicted GO
BP GO:0006120 mitochondrial electron transport, NADH to ubiquinone IEP Predicted GO
BP GO:0006825 copper ion transport IEP Predicted GO
BP GO:0009767 photosynthetic electron transport chain IEP Predicted GO
BP GO:0009772 photosynthetic electron transport in photosystem II IEP Predicted GO
MF GO:0016168 chlorophyll binding IEP Predicted GO
MF GO:0016530 metallochaperone activity IEP Predicted GO
MF GO:0016531 copper chaperone activity IEP Predicted GO
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Predicted GO
BP GO:0019684 photosynthesis, light reaction IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
BP GO:0022900 electron transport chain IEP Predicted GO
BP GO:0022904 respiratory electron transport chain IEP Predicted GO
CC GO:0031970 organelle envelope lumen IEP Predicted GO
CC GO:0031974 membrane-enclosed lumen IEP Predicted GO
CC GO:0043233 organelle lumen IEP Predicted GO
MF GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity IEP Predicted GO
CC GO:0070013 intracellular organelle lumen IEP Predicted GO
MF GO:0140104 molecular carrier activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001280 PSI_PsaA/B 238 280
IPR001280 PSI_PsaA/B 179 230
IPR001280 PSI_PsaA/B 28 107
IPR001280 PSI_PsaA/B 108 178
No external refs found!