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  5. Sopen03g005620

Sopen03g005620


Description : START domain


Gene families : OG_42_0000114 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000114_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen03g005620
Cluster HCCA clusters: Cluster_221

Target Alias Description ECC score Gene Family Method Actions
Brara.F01260.1 No alias HD-ZIP IV-type transcription factor 0.04 Orthogroups_2024-Update
Brara.G02009.1 No alias HD-ZIP IV-type transcription factor 0.04 Orthogroups_2024-Update
Brara.K01431.1 No alias HD-ZIP IV-type transcription factor 0.02 Orthogroups_2024-Update
Glyma.15G016500 No alias HD-ZIP IV family of homeobox-leucine zipper protein with... 0.03 Orthogroups_2024-Update
HORVU6Hr1G079410.4 No alias HD-ZIP IV-type transcription factor 0.02 Orthogroups_2024-Update
MA_10433688g0010 No alias (at4g21750 : 540.0) Encodes a homeobox protein similar... 0.02 Orthogroups_2024-Update
MA_38472g0010 No alias (at4g00730 : 709.0) Encodes a homeodomain protein of the... 0.04 Orthogroups_2024-Update
PSME_00042191-RA No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
Potri.002G230200 No alias homeodomain GLABROUS 2 0.03 Orthogroups_2024-Update
Pp1s173_90V6 No alias No description available 0.02 Orthogroups_2024-Update
Seita.7G203300.1 No alias HD-ZIP IV-type transcription factor 0.03 Orthogroups_2024-Update
Solyc03g098200 No alias Homeobox-leucine zipper family protein (AHRD V3.3 ***... 0.05 Orthogroups_2024-Update
Solyc05g015030 No alias Homeobox leucine zipper protein (AHRD V3.3 *** A0A072UAM9_MEDTR) 0.03 Orthogroups_2024-Update
Solyc08g062530 No alias Homeobox-leucine zipper family protein (AHRD V3.3 *-*... 0.02 Orthogroups_2024-Update
Sopen01g037400 No alias START domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
MF GO:0008289 lipid binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001356 Homeobox_dom 63 118
IPR002913 START_lipid-bd_dom 253 477
No external refs found!