Sopen03g005840

Description : Membrane transport protein

Gene families : OG_42_0000399 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000399_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen03g005840
Cluster	HCCA clusters: Cluster_103

Target	Alias	Description	ECC score	Gene Family Method
A4A49_11916	No alias	protein pin-likes 1	0.1	Orthogroups_2024-Update
A4A49_25006	No alias	protein pin-likes 6	0.03	Orthogroups_2024-Update
Bradi2g61980	No alias	Auxin efflux carrier family protein	0.03	Orthogroups_2024-Update
Brara.G03450.1	No alias	auxin efflux transporter (PILS) & auxin transporter (PILS)	0.03	Orthogroups_2024-Update
Glyma.01G156200	No alias	Auxin efflux carrier family protein	0.02	Orthogroups_2024-Update
Glyma.09G195600	No alias	Auxin efflux carrier family protein	0.02	Orthogroups_2024-Update
Glyma.19G072900	No alias	Auxin efflux carrier family protein	0.03	Orthogroups_2024-Update
HORVU5Hr1G073630.3	No alias	auxin efflux transporter (PILS) & auxin transporter (PILS)	0.02	Orthogroups_2024-Update
LOC_Os05g40330	No alias	auxin efflux carrier component, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os08g09190	No alias	auxin efflux carrier component, putative, expressed	0.03	Orthogroups_2024-Update
Sobic.001G520000.2	No alias	auxin efflux transporter (PILS) & auxin transporter (PILS)	0.02	Orthogroups_2024-Update
Sobic.004G210900.1	No alias	auxin efflux transporter (PILS) & auxin transporter (PILS)	0.05	Orthogroups_2024-Update
Solyc03g031990	No alias	Auxin efflux carrier family protein (AHRD V3.3 *** AT1G20925.1)	0.12	Orthogroups_2024-Update
evm.model.tig00021374.15	No alias	no hits & (original description: no original description)	0.01	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
CC	GO:0016021	integral component of membrane	IEA	InterProScan predictions
CC	GO:0031224	intrinsic component of membrane	None	Extended
CC	GO:0044425	membrane part	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	InterProScan predictions

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR004776	Mem_trans	10	406

External Links

No external refs found!