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  5. Sopen03g006010

Sopen03g006010


Description : Ubiquitin family


Gene families : OG_42_0001515 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001515_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen03g006010
Cluster HCCA clusters: Cluster_158

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G136769 No alias ubiquitin family protein 0.03 Orthogroups_2024-Update
Glyma.02G041700 No alias ubiquitin family protein 0.03 Orthogroups_2024-Update
PSME_00015675-RA No alias (at2g17200 : 196.0) DSK2; CONTAINS InterPro DOMAIN/s:... 0.02 Orthogroups_2024-Update
Pp1s143_17V6 No alias ubiquitin familyexpressed 0.02 Orthogroups_2024-Update
Solyc03g032160 No alias Ubiquitin 1, related protein (AHRD V3.3 *** G7K017_MEDTR) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR015940 UBA 519 555
IPR000626 Ubiquitin_dom 36 103
No external refs found!