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  5. Sopen03g006300

Sopen03g006300


Description : Leucine rich repeat


Gene families : OG_42_0000110 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000110_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen03g006300
Cluster HCCA clusters: Cluster_224

Target Alias Description ECC score Gene Family Method Actions
Glyma.14G044400 No alias receptor like protein 6 0.03 Orthogroups_2024-Update
LOC_Os01g06680 No alias retrotransposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update
Solyc01g009930 No alias Leucine-rich repeat receptor-like protein kinase family... 0.03 Orthogroups_2024-Update
Solyc12g009730 No alias Leucine-rich-repeat receptor-like protein (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Solyc12g009750 No alias No description available 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013210 LRR_N_plant-typ 30 81
IPR001611 Leu-rich_rpt 296 355
IPR001611 Leu-rich_rpt 464 521
IPR001611 Leu-rich_rpt 676 732
No external refs found!