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  5. Sopen03g006560

Sopen03g006560


Description : Domain associated at C-terminal with AAA


Gene families : OG_42_0000080 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000080_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen03g006560
Cluster HCCA clusters: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
Bradi4g00460 No alias AAA-ATPase 1 0.02 Orthogroups_2024-Update
GRMZM2G444560 No alias P-loop containing nucleoside triphosphate hydrolases... 0.02 Orthogroups_2024-Update
Glyma.02G053466 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 Orthogroups_2024-Update
Glyma.02G053600 No alias cytochrome BC1 synthesis 0.04 Orthogroups_2024-Update
Glyma.12G229000 No alias cytochrome BC1 synthesis 0.02 Orthogroups_2024-Update
HORVU5Hr1G000640.4 No alias Unknown function 0.06 Orthogroups_2024-Update
LOC_Os01g19260 No alias ATPase, putative, expressed 0.01 Orthogroups_2024-Update
LOC_Os10g22700 No alias AAA-type ATPase family protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_296237g0020 No alias (at3g50930 : 157.0) cytochrome BC1 synthesis (BCS1);... 0.07 Orthogroups_2024-Update
PSME_00011756-RA No alias (at4g30250 : 363.0) P-loop containing nucleoside... 0.02 Orthogroups_2024-Update
PSME_00036828-RA No alias (at5g40010 : 369.0) AAA-ATPase 1 (AATP1); FUNCTIONS IN:... 0.05 Orthogroups_2024-Update
Potri.004G012500 No alias AAA-ATPase 1 0.02 Orthogroups_2024-Update
Potri.004G012700 No alias AAA-ATPase 1 0.02 Orthogroups_2024-Update
Potri.T171900 No alias cytochrome BC1 synthesis 0.02 Orthogroups_2024-Update
Potri.T172000 No alias cytochrome BC1 synthesis 0.01 Orthogroups_2024-Update
Seita.3G407200.1 No alias Unknown function 0.01 Orthogroups_2024-Update
Seita.3G407300.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.9G394700.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.002G067000.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.002G067300.1 No alias Unknown function 0.01 Orthogroups_2024-Update
Solyc02g084910 No alias P-loop containing nucleoside triphosphate hydrolases... 0.01 Orthogroups_2024-Update
Sopen02g018900 No alias ATPase family associated with various cellular activities (AAA) 0.02 Orthogroups_2024-Update
Sopen02g029580 No alias ATPase family associated with various cellular activities (AAA) 0.01 Orthogroups_2024-Update
Sopen10g030270 No alias Domain associated at C-terminal with AAA 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR025753 AAA_N_dom 38 129
IPR003959 ATPase_AAA_core 257 392
No external refs found!