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  5. Sopen03g006730

Sopen03g006730


Description : Tub family


Gene families : OG_42_0000271 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000271_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen03g006730
Cluster HCCA clusters: Cluster_354

Target Alias Description ECC score Gene Family Method Actions
Bradi1g18380 No alias tubby like protein 3 0.02 Orthogroups_2024-Update
Bradi3g13080 No alias tubby like protein 10 0.02 Orthogroups_2024-Update
Brara.H00415.1 No alias TUB-type transcription factor 0.03 Orthogroups_2024-Update
Glyma.02G081800 No alias tubby like protein 5 0.02 Orthogroups_2024-Update
Glyma.13G269600 No alias tubby like protein 7 0.03 Orthogroups_2024-Update
Glyma.20G166900 No alias tubby like protein 1 0.02 Orthogroups_2024-Update
HORVU3Hr1G061930.1 No alias TUB-type transcription factor 0.02 Orthogroups_2024-Update
Potri.001G390200 No alias tubby like protein 7 0.04 Orthogroups_2024-Update
Pp1s222_25V6 No alias No description available 0.02 Orthogroups_2024-Update
Seita.6G003300.1 No alias TUB-type transcription factor 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001810 F-box_dom 54 106
IPR000007 Tubby_C 117 401
No external refs found!