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  5. Sopen03g007800

Sopen03g007800


Description : KOW motif


Gene families : OG_42_0002250 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002250_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood Solanum release: Sopen03g007800
Cluster HCCA clusters: Cluster_231

Target Alias Description ECC score Gene Family Method Actions
227399 No alias Translation protein SH3-like family protein 0.04 Orthogroups_2024-Update
A4A49_64025 No alias 60s ribosomal protein l26-1 0.03 Orthogroups_2024-Update
Brara.A02158.1 No alias component *(uL24) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Brara.C04297.1 No alias component *(uL24) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Cre01.g040000 No alias Translation protein SH3-like family protein 0.07 Orthogroups_2024-Update
HORVU3Hr1G026880.1 No alias component *(uL24) of large ribosomal-subunit (LSU) proteome 0.03 Orthogroups_2024-Update
Kfl00486_0110 kfl00486_0110_v1.1 (at3g49910 : 157.0) Translation protein SH3-like family... 0.02 Orthogroups_2024-Update
Mp2g12870.1 No alias component RPL26 of LSU proteome component 0.03 Orthogroups_2024-Update
PSME_00027135-RA No alias (at5g67510 : 172.0) Translation protein SH3-like family... 0.05 Orthogroups_2024-Update
Potri.007G055900 No alias Translation protein SH3-like family protein 0.03 Orthogroups_2024-Update
Potri.007G085200 No alias Translation protein SH3-like family protein 0.04 Orthogroups_2024-Update
Pp1s120_90V6 No alias putative ribosomal protein L26 [Oryza sativa (japonica... 0.04 Orthogroups_2024-Update
Pp1s13_138V6 No alias 60s ribosomal protein 0.04 Orthogroups_2024-Update
Pp1s30_298V6 No alias 60s ribosomal protein 0.02 Orthogroups_2024-Update
Pp1s69_191V6 No alias putative ribosomal protein L26 [Oryza sativa (japonica... 0.04 Orthogroups_2024-Update
Seita.5G096600.1 No alias component *(uL24) of large ribosomal-subunit (LSU) proteome 0.04 Orthogroups_2024-Update
Sobic.003G078200.1 No alias component *(uL24) of large ribosomal-subunit (LSU) proteome 0.05 Orthogroups_2024-Update
Solyc02g064670 No alias 60S ribosomal protein L26-1 (AHRD V3.3 *** RL261_ARATH) 0.04 Orthogroups_2024-Update
Solyc02g092430 No alias 60S ribosomal protein L26-1 (AHRD V3.3 *** RL261_ARATH) 0.05 Orthogroups_2024-Update
evm.model.contig_2053.5 No alias (at5g67510 : 146.0) Translation protein SH3-like family... 0.04 Orthogroups_2024-Update
evm.model.tig00000144.60 No alias (at3g49910 : 158.0) Translation protein SH3-like family... 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
CC GO:0015934 large ribosomal subunit IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR005756 Ribosomal_L26/L24P_euk/arc 8 121
IPR005824 KOW 51 82
No external refs found!