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  5. Sopen03g008700

Sopen03g008700


Description : gag-polypeptide of LTR copia-type


Gene families : OG_42_0003236 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003236_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen03g008700
Cluster HCCA clusters: Cluster_198

Target Alias Description ECC score Gene Family Method Actions
Sopen08g005180 No alias Zinc knuckle 0.03 Orthogroups_2024-Update
Sopen11g015810 No alias Zinc knuckle 0.03 Orthogroups_2024-Update
Sopen11g025120 No alias Zinc knuckle 0.03 Orthogroups_2024-Update
Sopen12g019060 No alias Zinc knuckle 0.03 Orthogroups_2024-Update
Sopen12g021680 No alias Zinc knuckle 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

No InterPro domains available for this sequence

No external refs found!