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  5. Sopen03g009070

Sopen03g009070


Description : Photosynthetic reaction centre protein


Gene families : OG_42_0000098 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000098_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen03g009070
Cluster HCCA clusters: Cluster_296

Target Alias Description ECC score Gene Family Method Actions
110618 No alias methyl esterase 13 0.02 Orthogroups_2024-Update
At1g33990 No alias Putative methylesterase 14, chloroplastic... 0.03 Orthogroups_2024-Update
GRMZM2G428987 No alias methyl esterase 3 0.02 Orthogroups_2024-Update
PSME_00031789-RA No alias (at2g23590 : 102.0) Encodes a protein shown to have... 0.02 Orthogroups_2024-Update
PSME_00032263-RA No alias (at2g23620 : 193.0) Encodes a protein shown to have... 0.02 Orthogroups_2024-Update
PSME_00053857-RA No alias (at3g50440 : 100.0) Encodes a protein shown to have... 0.02 Orthogroups_2024-Update
Seita.5G442900.1 No alias Unknown function 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0009772 photosynthetic electron transport in photosystem II IEA InterProScan predictions
BP GO:0019684 photosynthesis, light reaction IEA InterProScan predictions
MF GO:0045156 electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000484 Photo_RC_L/M 1 55
No external refs found!