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  5. Sopen03g009450

Sopen03g009450


Description : Pyridoxal-dependent decarboxylase conserved domain


Gene families : OG_42_0000627 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000627_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen03g009450
Cluster HCCA clusters: Cluster_94

Target Alias Description ECC score Gene Family Method Actions
78872 No alias Pyridoxal phosphate (PLP)-dependent transferases... 0.02 Orthogroups_2024-Update
At2g20340 No alias Tyrosine decarboxylase 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8RY79] 0.04 Orthogroups_2024-Update
At4g28680 No alias L-tyrosine decarboxylase [Source:TAIR;Acc:AT4G28680] 0.02 Orthogroups_2024-Update
Bradi2g51120 No alias Pyridoxal phosphate (PLP)-dependent transferases... 0.02 Orthogroups_2024-Update
Bradi3g14780 No alias Pyridoxal phosphate (PLP)-dependent transferases... 0.03 Orthogroups_2024-Update
Brara.G00044.1 No alias EC_4.1 carbon-carbon lyase & aromatic amino acid decarboxylase 0.03 Orthogroups_2024-Update
GRMZM2G108514 No alias Pyridoxal phosphate (PLP)-dependent transferases... 0.03 Orthogroups_2024-Update
LOC_Os08g04560 No alias decarboxylase, putative, expressed 0.02 Orthogroups_2024-Update
Potri.004G036200 No alias Pyridoxal phosphate (PLP)-dependent transferases... 0.03 Orthogroups_2024-Update
Potri.013G052900 No alias Pyridoxal phosphate (PLP)-dependent transferases... 0.03 Orthogroups_2024-Update
Potri.016G114300 No alias Pyridoxal phosphate (PLP)-dependent transferases... 0.03 Orthogroups_2024-Update
Seita.2G117700.1 No alias EC_4.1 carbon-carbon lyase & aromatic amino acid decarboxylase 0.03 Orthogroups_2024-Update
Seita.6G068000.1 No alias EC_4.1 carbon-carbon lyase & aromatic amino acid decarboxylase 0.03 Orthogroups_2024-Update
Seita.9G256700.1 No alias EC_4.1 carbon-carbon lyase & aromatic amino acid decarboxylase 0.03 Orthogroups_2024-Update
Sobic.003G309700.1 No alias aromatic amino acid decarboxylase & EC_4.1 carbon-carbon lyase 0.02 Orthogroups_2024-Update
Sobic.007G035500.1 No alias EC_4.1 carbon-carbon lyase & aromatic amino acid decarboxylase 0.03 Orthogroups_2024-Update
Solyc07g054280 No alias Tyrosine decarboxylase (AHRD V3.3 *** Q000T5_ARICO) 0.07 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016831 carboxy-lyase activity IEA InterProScan predictions
BP GO:0019752 carboxylic acid metabolic process IEA InterProScan predictions
MF GO:0030170 pyridoxal phosphate binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002129 PyrdxlP-dep_de-COase 62 435
No external refs found!