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Description : PPR repeat
Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Solanum release: Sopen03g011150 | |
| Cluster | HCCA clusters: Cluster_107 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| At1g03510 | No alias | Putative pentatricopeptide repeat-containing protein... | 0.03 | Orthogroups_2024-Update | |
| Bradi1g27320 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Bradi1g38705 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.05 | Orthogroups_2024-Update | |
| Bradi2g62180 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Bradi3g37252 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Bradi3g48960 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.06 | Orthogroups_2024-Update | |
| Bradi4g15307 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.04 | Orthogroups_2024-Update | |
| GRMZM2G019689 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| GRMZM2G020008 | No alias | mitochondrial RNAediting factor 1 | 0.02 | Orthogroups_2024-Update | |
| GRMZM2G031588 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
| GRMZM2G060337 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| GRMZM2G073017 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
| GRMZM2G098869 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
| GRMZM2G144071 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| GRMZM2G331779 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| GRMZM2G430710 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| GRMZM2G456114 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
| GRMZM2G474929 | No alias | mitochondrial editing factor 21 | 0.03 | Orthogroups_2024-Update | |
| GRMZM5G862936 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.02G160400 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.06G322500 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.07G173900 | No alias | Pentatricopeptide repeat (PPR-like) superfamily protein | 0.05 | Orthogroups_2024-Update | |
| Glyma.10G190600 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.12G183600 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.17G209700 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Glyma.19G141800 | No alias | mitochondrial RNAediting factor 1 | 0.03 | Orthogroups_2024-Update | |
| HORVU0Hr1G023470.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| HORVU2Hr1G084530.3 | No alias | RNA editing factor *(SLO4) | 0.03 | Orthogroups_2024-Update | |
| HORVU4Hr1G064880.2 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| HORVU6Hr1G063760.2 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| HORVU7Hr1G030840.1 | No alias | RNA editing factor *(MEF29) | 0.03 | Orthogroups_2024-Update | |
| MA_122899g0010 | No alias | (at3g57430 : 674.0) Encodes a chloroplast RNA editing... | 0.04 | Orthogroups_2024-Update | |
| MA_183278g0010 | No alias | (at3g12770 : 619.0) Encodes a pentatricopeptide repeat... | 0.03 | Orthogroups_2024-Update | |
| PSME_00002609-RA | No alias | (at1g11290 : 641.0) Pentatricopeptide Repeat Protein... | 0.03 | Orthogroups_2024-Update | |
| PSME_00003874-RA | No alias | (at4g33170 : 590.0) Tetratricopeptide repeat (TPR)-like... | 0.03 | Orthogroups_2024-Update | |
| PSME_00004138-RA | No alias | (at1g11290 : 633.0) Pentatricopeptide Repeat Protein... | 0.03 | Orthogroups_2024-Update | |
| PSME_00004346-RA | No alias | (at4g18750 : 679.0) Encodes a pentatricopeptide (PPR)... | 0.03 | Orthogroups_2024-Update | |
| PSME_00005439-RA | No alias | (at2g03880 : 518.0) Pentatricopeptide repeat (PPR)... | 0.03 | Orthogroups_2024-Update | |
| PSME_00007652-RA | No alias | (at1g11290 : 614.0) Pentatricopeptide Repeat Protein... | 0.04 | Orthogroups_2024-Update | |
| PSME_00011140-RA | No alias | (at1g11290 : 575.0) Pentatricopeptide Repeat Protein... | 0.03 | Orthogroups_2024-Update | |
| PSME_00016248-RA | No alias | (at3g12770 : 631.0) Encodes a pentatricopeptide repeat... | 0.03 | Orthogroups_2024-Update | |
| PSME_00017531-RA | No alias | (at1g11290 : 661.0) Pentatricopeptide Repeat Protein... | 0.03 | Orthogroups_2024-Update | |
| PSME_00017626-RA | No alias | (at4g13650 : 693.0) Pentatricopeptide repeat (PPR)... | 0.03 | Orthogroups_2024-Update | |
| PSME_00022685-RA | No alias | (at3g46790 : 552.0) Encodes a member of a PCMP (plant... | 0.03 | Orthogroups_2024-Update | |
| PSME_00024530-RA | No alias | (at4g18750 : 707.0) Encodes a pentatricopeptide (PPR)... | 0.03 | Orthogroups_2024-Update | |
| PSME_00024580-RA | No alias | (at4g02750 : 440.0) Tetratricopeptide repeat (TPR)-like... | 0.04 | Orthogroups_2024-Update | |
| PSME_00028519-RA | No alias | (at2g22070 : 606.0) pentatricopeptide (PPR)... | 0.03 | Orthogroups_2024-Update | |
| PSME_00032959-RA | No alias | (at3g46790 : 529.0) Encodes a member of a PCMP (plant... | 0.03 | Orthogroups_2024-Update | |
| PSME_00036495-RA | No alias | (at1g11290 : 559.0) Pentatricopeptide Repeat Protein... | 0.03 | Orthogroups_2024-Update | |
| PSME_00048581-RA | No alias | (at4g02750 : 590.0) Tetratricopeptide repeat (TPR)-like... | 0.02 | Orthogroups_2024-Update | |
| PSME_00056594-RA | No alias | (at3g53360 : 383.0) Tetratricopeptide repeat (TPR)-like... | 0.03 | Orthogroups_2024-Update | |
| PSME_00057187-RA | No alias | (at1g11290 : 659.0) Pentatricopeptide Repeat Protein... | 0.03 | Orthogroups_2024-Update | |
| Potri.001G019500 | No alias | SLOW GROWTH 1 | 0.03 | Orthogroups_2024-Update | |
| Potri.001G186500 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.05 | Orthogroups_2024-Update | |
| Potri.001G217600 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Potri.001G243800 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Potri.001G258500 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Potri.001G322100 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Potri.002G014800 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Potri.003G031600 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Potri.003G074500 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Potri.003G164900 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Potri.004G043400 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.04 | Orthogroups_2024-Update | |
| Potri.004G059400 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Potri.004G237000 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Potri.005G005700 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Potri.006G105700 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Potri.007G068600 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.04 | Orthogroups_2024-Update | |
| Potri.007G146800 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Potri.012G048800 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Potri.015G047600 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Potri.017G137200 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Potri.018G040100 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.02 | Orthogroups_2024-Update | |
| Potri.018G067500 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
| Seita.1G158100.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Seita.2G001800.1 | No alias | RNA editing factor *(ELI1) | 0.02 | Orthogroups_2024-Update | |
| Sobic.001G001200.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Sobic.001G069300.2 | No alias | RNA editing factor *(DEK36) | 0.02 | Orthogroups_2024-Update | |
| Sobic.001G212200.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Sobic.001G312700.1 | No alias | RNA editing factor *(MEF25) | 0.03 | Orthogroups_2024-Update | |
| Sobic.001G478900.2 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| Sobic.002G084400.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| Sobic.002G172500.3 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Sobic.002G389200.2 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Sobic.003G047400.1 | No alias | RNA editing factor *(OTP81) | 0.02 | Orthogroups_2024-Update | |
| Sobic.003G237100.2 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
| Sobic.003G337200.1 | No alias | RNA editing factor *(MEF10) | 0.03 | Orthogroups_2024-Update | |
| Sobic.004G051600.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Sobic.004G217900.2 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Sobic.006G069100.3 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Sobic.007G137800.3 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Sobic.008G009000.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Sobic.009G136200.1 | No alias | RNA editing factor *(MEF32) | 0.02 | Orthogroups_2024-Update | |
| Sobic.009G155400.3 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
| Sobic.010G066900.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Sobic.010G190900.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Sobic.010G232700.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
| Solyc01g006920 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.04 | Orthogroups_2024-Update | |
| Solyc01g020340 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.04 | Orthogroups_2024-Update | |
| Solyc01g081290 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.02 | Orthogroups_2024-Update | |
| Solyc01g081560 | No alias | LOW QUALITY:Pentatricopeptide repeat-containing protein... | 0.05 | Orthogroups_2024-Update | |
| Solyc01g090510 | No alias | Pentatricopeptide repeat-containing protein, putative... | 0.03 | Orthogroups_2024-Update | |
| Solyc01g091610 | No alias | LOW QUALITY:Pentatricopeptide repeat-containing protein... | 0.02 | Orthogroups_2024-Update | |
| Solyc01g094850 | No alias | Pentatricopeptide repeat superfamily protein, putative... | 0.03 | Orthogroups_2024-Update | |
| Solyc01g095160 | No alias | Pentatricopeptide repeat (PPR) superfamily protein (AHRD... | 0.04 | Orthogroups_2024-Update | |
| Solyc01g100800 | No alias | Pentatricopeptide repeat-containing family protein (AHRD... | 0.04 | Orthogroups_2024-Update | |
| Solyc02g088650 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.03 | Orthogroups_2024-Update | |
| Solyc03g006990 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.03 | Orthogroups_2024-Update | |
| Solyc03g007840 | No alias | Pentatricopeptide repeat-containing protein, putative... | 0.03 | Orthogroups_2024-Update | |
| Solyc03g063690 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.04 | Orthogroups_2024-Update | |
| Solyc03g097850 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.06 | Orthogroups_2024-Update | |
| Solyc04g051480 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.03 | Orthogroups_2024-Update | |
| Solyc04g064750 | No alias | Pentatricopeptide repeat superfamily protein (AHRD V3.3... | 0.05 | Orthogroups_2024-Update | |
| Solyc04g082870 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.03 | Orthogroups_2024-Update | |
| Solyc05g013200 | No alias | Pentatricopeptide repeat-containing family protein (AHRD... | 0.03 | Orthogroups_2024-Update | |
| Solyc06g084580 | No alias | Pentatricopeptide repeat-containing protein family (AHRD... | 0.02 | Orthogroups_2024-Update | |
| Solyc07g042760 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.02 | Orthogroups_2024-Update | |
| Solyc07g055310 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.06 | Orthogroups_2024-Update | |
| Solyc09g009950 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.05 | Orthogroups_2024-Update | |
| Solyc10g008590 | No alias | Pentatricopeptide repeat-containing protein, putative... | 0.03 | Orthogroups_2024-Update | |
| Solyc10g080220 | No alias | Pentatricopeptide repeat superfamily protein (AHRD V3.3... | 0.04 | Orthogroups_2024-Update | |
| Solyc11g005970 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.03 | Orthogroups_2024-Update | |
| Solyc11g006700 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.04 | Orthogroups_2024-Update | |
| Solyc11g011860 | No alias | Pentatricopeptide repeat-containing protein family (AHRD... | 0.03 | Orthogroups_2024-Update | |
| Solyc11g067210 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.04 | Orthogroups_2024-Update | |
| Solyc11g071370 | No alias | Pentatricopeptide repeat-containing family protein (AHRD... | 0.06 | Orthogroups_2024-Update | |
| Solyc12g042400 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.05 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| No external refs found! |