1. Home
  2. Species
  3. Solanum pennellii
  4. Sequence
  5. Sopen03g011670

Sopen03g011670


Description : Retrotransposon gag protein


Gene families : OG_42_0000103 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000103_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen03g011670
Cluster HCCA clusters: Cluster_89

Target Alias Description ECC score Gene Family Method Actions
Bradi5g19831 No alias Function unknown 0.02 Orthogroups_2024-Update
LOC_Os01g37380 No alias transposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update
Sobic.004G172000.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc01g044440 No alias No description available 0.03 Orthogroups_2024-Update
Solyc08g008560 No alias No description available 0.03 Orthogroups_2024-Update
Solyc10g039300 No alias No description available 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR005162 Retrotrans_gag_dom 292 388
No external refs found!